RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 CFAP43Q8NDM7 1665 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 SOCS7O14512 581 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 LILRA1O75019 489 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 ADH1AP07327 375 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 FHOD3Q2V2M9 1422 aa8.97□□□□□ -0.97
TMEM260-212ENST00000556810 ADGRL1O94910 1474 aa8.96□□□□□ -0.97
TMEM260-212ENST00000556810 CCDC18Q5T9S5 1454 aa8.96□□□□□ -0.97
TMEM260-212ENST00000556810 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
TMEM260-212ENST00000556810 HECW1Q76N89 1606 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 ADD1P35611 737 aaKnown RBP8.96□□□□□ -0.98
TMEM260-212ENST00000556810 CTSOP43234 321 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-212ENST00000556810 PTSQ03393 145 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
TMEM260-212ENST00000556810 UACAQ9BZF9 1416 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.98
TMEM260-212ENST00000556810 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-212ENST00000556810 NR1H3Q13133 447 aa8.95□□□□□ -0.98
TMEM260-212ENST00000556810 ZSCAN1Q8NBB4 408 aa8.95□□□□□ -0.98
TMEM260-212ENST00000556810 ZNF395Q9H8N7 513 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-212ENST00000556810 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-212ENST00000556810 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
TMEM260-212ENST00000556810 PCF11O94913 1555 aaKnown RBP8.95□□□□□ -0.98
TMEM260-212ENST00000556810 APBB1O00213 710 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-212ENST00000556810 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 CYLDQ9NQC7 956 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 SNRKQ9NRH2 765 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 CDK11AQ9UQ88 783 aaPredicted RBP8.94□□□□□ -0.98
TMEM260-212ENST00000556810 NDUFB9Q9Y6M9 179 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 DISP1Q96F81 1524 aa8.94□□□□□ -0.98
TMEM260-212ENST00000556810 GPR37L1O60883 481 aa8.93□□□□□ -0.98
TMEM260-212ENST00000556810 PTGIRP43119 386 aa8.93□□□□□ -0.98
TMEM260-212ENST00000556810 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
TMEM260-212ENST00000556810 KIAA0556O60303 1618 aa8.93□□□□□ -0.98
TMEM260-212ENST00000556810 MAP3K4Q9Y6R4 1608 aa8.93□□□□□ -0.98
TMEM260-212ENST00000556810 KDM5BQ9UGL1 1544 aa8.92□□□□□ -0.98
TMEM260-212ENST00000556810 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
TMEM260-212ENST00000556810 MCCD1P59942 119 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-212ENST00000556810 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-212ENST00000556810 RNF217Q8TC41 542 aa8.92□□□□□ -0.98
TMEM260-212ENST00000556810 ZNF330Q9Y3S2 320 aaPredicted RBP8.92□□□□□ -0.98
TMEM260-212ENST00000556810 ZCCHC11Q5TAX3 1644 aaKnown RBP8.91□□□□□ -0.98
TMEM260-212ENST00000556810 MTUS2Q5JR59 1369 aa8.91□□□□□ -0.98
TMEM260-212ENST00000556810 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
TMEM260-212ENST00000556810 CCDC125Q86Z20 511 aa8.91□□□□□ -0.98
TMEM260-212ENST00000556810 CCDC155Q8N6L0 562 aa8.91□□□□□ -0.98
TMEM260-212ENST00000556810 ZNF592Q92610 1267 aa8.91□□□□□ -0.98
TMEM260-212ENST00000556810 SUPT6HQ7KZ85 1726 aaKnown RBP8.91□□□□□ -0.98
TMEM260-212ENST00000556810 HECW2Q9P2P5 1572 aa8.9□□□□□ -0.98
TMEM260-212ENST00000556810 TEX14Q8IWB6 1497 aa8.9□□□□□ -0.98
TMEM260-212ENST00000556810 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
TMEM260-212ENST00000556810 SLC35F4A4IF30 521 aa8.9□□□□□ -0.98
TMEM260-212ENST00000556810 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
TMEM260-212ENST00000556810 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
TMEM260-212ENST00000556810 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.99
TMEM260-212ENST00000556810 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
TMEM260-212ENST00000556810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.89□□□□□ -0.99
TMEM260-212ENST00000556810 RAPGEF6Q8TEU7 1601 aa8.88□□□□□ -0.99
TMEM260-212ENST00000556810 ACIN1Q9UKV3 1341 aaKnown RBP8.88□□□□□ -0.99
TMEM260-212ENST00000556810 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
TMEM260-212ENST00000556810 CCER1Q8TC90 406 aaPredicted RBP8.88□□□□□ -0.99
TMEM260-212ENST00000556810 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
TMEM260-212ENST00000556810 ERVK-9P63128 1117 aa8.87□□□□□ -0.99
TMEM260-212ENST00000556810 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
TMEM260-212ENST00000556810 NANOS1Q8WY41 292 aaKnown RBP8.87□□□□□ -0.99
TMEM260-212ENST00000556810 CD109Q6YHK3 1445 aa8.87□□□□□ -0.99
TMEM260-212ENST00000556810 WDR7Q9Y4E6 1490 aa8.86□□□□□ -0.99
TMEM260-212ENST00000556810 ITGA6P23229 1130 aa8.86□□□□□ -0.99
TMEM260-212ENST00000556810 SENP3-EIF4A1A0A087X0R7 540 aa8.85□□□□□ -0.99
TMEM260-212ENST00000556810 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-212ENST00000556810 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
TMEM260-212ENST00000556810 PCDHB11Q9Y5F2 797 aa8.85□□□□□ -0.99
TMEM260-212ENST00000556810 CLSPNQ9HAW4 1339 aa8.84□□□□□ -0.99
TMEM260-212ENST00000556810 KRT76Q01546 638 aa8.84□□□□□ -0.99
TMEM260-212ENST00000556810 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
TMEM260-212ENST00000556810 TBC1D2BQ9UPU7 963 aa8.84□□□□□ -0.99
TMEM260-212ENST00000556810 CDC14CA4D256 554 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 MEN1O00255 615 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 SCTRP47872 440 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 CNTNAP3BQ96NU0 1288 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
TMEM260-212ENST00000556810 CNTNAP3Q9BZ76 1288 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 PRM3Q9NNZ6 103 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
TMEM260-212ENST00000556810 A0A1W2PRU2 124 aa8.82□□□□□ -1
TMEM260-212ENST00000556810 PLEKHD1A6NEE1 506 aa8.82□□□□□ -1
TMEM260-212ENST00000556810 GPC1P35052 558 aa8.82□□□□□ -1
TMEM260-212ENST00000556810 SV2AQ7L0J3 742 aa8.82□□□□□ -1
TMEM260-212ENST00000556810 MIA2Q96PC5 1412 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 ARID3CA6NKF2 412 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 RHOQP17081 205 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 FAM50AQ14320 339 aaKnown RBP8.81□□□□□ -1
TMEM260-212ENST00000556810 OSBPL3Q9H4L5 887 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms