RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 U2SURPO15042 1029 aaKnown RBP14.51□□□□□ -0.09
XRCC3-216ENST00000556682 NFATC2IPQ8NCF5 419 aa14.51□□□□□ -0.09
XRCC3-216ENST00000556682 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
XRCC3-216ENST00000556682 NUDCQ9Y266 331 aa14.51□□□□□ -0.09
XRCC3-216ENST00000556682 TOGARAM1Q9Y4F4 1720 aa14.5□□□□□ -0.09
XRCC3-216ENST00000556682 SSFA2P28290 1259 aa14.5□□□□□ -0.09
XRCC3-216ENST00000556682 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
XRCC3-216ENST00000556682 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
XRCC3-216ENST00000556682 LINC00116Q8NCU8 138 aa14.5□□□□□ -0.09
XRCC3-216ENST00000556682 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
XRCC3-216ENST00000556682 ITGB4P16144 1822 aa14.49□□□□□ -0.09
XRCC3-216ENST00000556682 KDM6AO15550 1401 aaPredicted RBP14.49□□□□□ -0.09
XRCC3-216ENST00000556682 MAP3K5Q99683 1374 aa14.48□□□□□ -0.09
XRCC3-216ENST00000556682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
XRCC3-216ENST00000556682 GNPATO15228 680 aa14.48□□□□□ -0.09
XRCC3-216ENST00000556682 PHF14O94880 888 aa14.48□□□□□ -0.09
XRCC3-216ENST00000556682 ITPK1Q13572 414 aa14.48□□□□□ -0.09
XRCC3-216ENST00000556682 MTHFSDQ2M296 383 aaKnown RBP14.48□□□□□ -0.09
XRCC3-216ENST00000556682 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
XRCC3-216ENST00000556682 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
XRCC3-216ENST00000556682 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
XRCC3-216ENST00000556682 GAS2L2Q8NHY3 880 aa14.47□□□□□ -0.09
XRCC3-216ENST00000556682 SLC52A2Q9HAB3 445 aa14.47□□□□□ -0.09
XRCC3-216ENST00000556682 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
XRCC3-216ENST00000556682 RNMTO43148 476 aaKnown RBP14.46□□□□□ -0.09
XRCC3-216ENST00000556682 PTCD1O75127 700 aaKnown RBP14.46□□□□□ -0.09
XRCC3-216ENST00000556682 PPP2R1AP30153 589 aa14.46□□□□□ -0.09
XRCC3-216ENST00000556682 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
XRCC3-216ENST00000556682 C5P01031 1676 aa14.46□□□□□ -0.1
XRCC3-216ENST00000556682 C4BP0C0L5 1744 aa14.45□□□□□ -0.1
XRCC3-216ENST00000556682 YY1P25490 414 aa14.45□□□□□ -0.1
XRCC3-216ENST00000556682 LGR6Q9HBX8 967 aa14.45□□□□□ -0.1
XRCC3-216ENST00000556682 GPR162Q16538 588 aa14.44□□□□□ -0.1
XRCC3-216ENST00000556682 SLC4A9Q96Q91 983 aa14.44□□□□□ -0.1
XRCC3-216ENST00000556682 CNTNAP4Q9C0A0 1308 aa14.43□□□□□ -0.1
XRCC3-216ENST00000556682 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
XRCC3-216ENST00000556682 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
XRCC3-216ENST00000556682 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
XRCC3-216ENST00000556682 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.1
XRCC3-216ENST00000556682 CD2APQ9Y5K6 639 aa14.43□□□□□ -0.1
XRCC3-216ENST00000556682 COL3A1P02461 1466 aaPredicted RBP14.43□□□□□ -0.1
XRCC3-216ENST00000556682 FCHSD2O94868 740 aa14.42□□□□□ -0.1
XRCC3-216ENST00000556682 RFC4P35249 363 aa14.42□□□□□ -0.1
XRCC3-216ENST00000556682 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
XRCC3-216ENST00000556682 TAF1LQ8IZX4 1826 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 NEFMP07197 916 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 TEFQ10587 303 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 NLGN1Q8N2Q7 840 aa14.41□□□□□ -0.1
XRCC3-216ENST00000556682 CRKLP46109 303 aaKnown RBP14.4□□□□□ -0.1
XRCC3-216ENST00000556682 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
XRCC3-216ENST00000556682 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
XRCC3-216ENST00000556682 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
XRCC3-216ENST00000556682 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
XRCC3-216ENST00000556682 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
XRCC3-216ENST00000556682 VSIG10Q8N0Z9 540 aa14.39□□□□□ -0.11
XRCC3-216ENST00000556682 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
XRCC3-216ENST00000556682 NLGN2Q8NFZ4 835 aa14.38□□□□□ -0.11
XRCC3-216ENST00000556682 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
XRCC3-216ENST00000556682 PHACTR3Q96KR7 559 aa14.38□□□□□ -0.11
XRCC3-216ENST00000556682 ZNF831Q5JPB2 1677 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 GRIN3BO60391 1043 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 MMP10P09238 476 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 RALBP1Q15311 655 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
XRCC3-216ENST00000556682 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 COL24A1Q17RW2 1714 aa14.37□□□□□ -0.11
XRCC3-216ENST00000556682 UBR3Q6ZT12 1888 aa14.36□□□□□ -0.11
XRCC3-216ENST00000556682 STARD3NLO95772 234 aa14.36□□□□□ -0.11
XRCC3-216ENST00000556682 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-216ENST00000556682 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
XRCC3-216ENST00000556682 MRC1P22897 1456 aa14.36□□□□□ -0.11
XRCC3-216ENST00000556682 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
XRCC3-216ENST00000556682 ZPR1O75312 459 aa14.35□□□□□ -0.11
XRCC3-216ENST00000556682 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
XRCC3-216ENST00000556682 INTS5Q6P9B9 1019 aaKnown RBP14.35□□□□□ -0.11
XRCC3-216ENST00000556682 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
XRCC3-216ENST00000556682 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
XRCC3-216ENST00000556682 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
XRCC3-216ENST00000556682 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
XRCC3-216ENST00000556682 CYP19A1P11511 503 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-216ENST00000556682 GYS1P13807 737 aa14.34□□□□□ -0.11
XRCC3-216ENST00000556682 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
XRCC3-216ENST00000556682 CEMIPQ8WUJ3 1361 aa14.33□□□□□ -0.12
XRCC3-216ENST00000556682 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-216ENST00000556682 NPM2Q86SE8 214 aaKnown RBP14.32□□□□□ -0.12
XRCC3-216ENST00000556682 ZNF496Q96IT1 587 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-216ENST00000556682 USP42Q9H9J4 1324 aaKnown RBP14.32□□□□□ -0.12
XRCC3-216ENST00000556682 TGFB2P61812 414 aa14.31□□□□□ -0.12
XRCC3-216ENST00000556682 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
XRCC3-216ENST00000556682 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
XRCC3-216ENST00000556682 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 A0A087WZG4 1122 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
XRCC3-216ENST00000556682 CANXP27824 592 aaKnown RBP14.3□□□□□ -0.12
XRCC3-216ENST00000556682 MCM10Q7L590 875 aa14.3□□□□□ -0.12
XRCC3-216ENST00000556682 SRP68Q9UHB9 627 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms