RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
NRXN3-213ENST00000556496 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
NRXN3-213ENST00000556496 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
NRXN3-213ENST00000556496 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
NRXN3-213ENST00000556496 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
NRXN3-213ENST00000556496 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
NRXN3-213ENST00000556496 ADAMTSL3P82987 1691 aa13.06□□□□□ -0.32
NRXN3-213ENST00000556496 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
NRXN3-213ENST00000556496 PNMA6EA0A0J9YXQ4 647 aa13.05□□□□□ -0.32
NRXN3-213ENST00000556496 EIF4A1P60842 406 aaKnown RBP13.05□□□□□ -0.32
NRXN3-213ENST00000556496 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
NRXN3-213ENST00000556496 CASC1Q6TDU7 716 aa13.05□□□□□ -0.32
NRXN3-213ENST00000556496 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
NRXN3-213ENST00000556496 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
NRXN3-213ENST00000556496 MCM4P33991 863 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 TEFQ10587 303 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 USP44Q9H0E7 712 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
NRXN3-213ENST00000556496 FAM208AQ9UK61 1670 aaKnown RBP13.04□□□□□ -0.32
NRXN3-213ENST00000556496 PDE1AP54750 535 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 KCNQ3O43525 872 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 HSP90AA1P07900 732 aaKnown RBP13.04□□□□□ -0.32
NRXN3-213ENST00000556496 DDIT3P35638 169 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
NRXN3-213ENST00000556496 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
NRXN3-213ENST00000556496 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
NRXN3-213ENST00000556496 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 LRRCC1Q9C099 1032 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
NRXN3-213ENST00000556496 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.32
NRXN3-213ENST00000556496 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.32
NRXN3-213ENST00000556496 HOXB7P09629 217 aa13.02□□□□□ -0.33
NRXN3-213ENST00000556496 TSHZ3Q63HK5 1081 aa13.02□□□□□ -0.33
NRXN3-213ENST00000556496 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
NRXN3-213ENST00000556496 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
NRXN3-213ENST00000556496 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
NRXN3-213ENST00000556496 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
NRXN3-213ENST00000556496 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
NRXN3-213ENST00000556496 RABEP1Q15276 862 aa13.01□□□□□ -0.33
NRXN3-213ENST00000556496 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
NRXN3-213ENST00000556496 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
NRXN3-213ENST00000556496 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
NRXN3-213ENST00000556496 REC8O95072 547 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
NRXN3-213ENST00000556496 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 ANXA1P04083 346 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 MX1P20591 662 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 SLIT3O75094 1523 aa13□□□□□ -0.33
NRXN3-213ENST00000556496 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 SALL3Q9BXA9 1300 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
NRXN3-213ENST00000556496 C1orf167Q5SNV9 1468 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 ERC2O15083 957 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 PXDNQ92626 1479 aa12.99□□□□□ -0.33
NRXN3-213ENST00000556496 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
NRXN3-213ENST00000556496 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
NRXN3-213ENST00000556496 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
NRXN3-213ENST00000556496 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
NRXN3-213ENST00000556496 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
NRXN3-213ENST00000556496 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
NRXN3-213ENST00000556496 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
NRXN3-213ENST00000556496 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 NCAPD2Q15021 1401 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 IL1RAPL2Q9NP60 686 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
NRXN3-213ENST00000556496 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 TRAK2O60296 914 aa12.97□□□□□ -0.33
NRXN3-213ENST00000556496 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
NRXN3-213ENST00000556496 ERBB3P21860 1342 aa12.96□□□□□ -0.33
NRXN3-213ENST00000556496 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
NRXN3-213ENST00000556496 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
NRXN3-213ENST00000556496 ATF3P18847 181 aa12.96□□□□□ -0.33
NRXN3-213ENST00000556496 RILPL2Q969X0 211 aa12.96□□□□□ -0.33
NRXN3-213ENST00000556496 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
NRXN3-213ENST00000556496 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.34
NRXN3-213ENST00000556496 STAP2Q9UGK3 403 aa12.96□□□□□ -0.34
NRXN3-213ENST00000556496 POLA2Q14181 598 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
NRXN3-213ENST00000556496 ADCY9O60503 1353 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
NRXN3-213ENST00000556496 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
NRXN3-213ENST00000556496 ST18O60284 1047 aa12.94□□□□□ -0.34
NRXN3-213ENST00000556496 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
NRXN3-213ENST00000556496 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
NRXN3-213ENST00000556496 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms