RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 IGSF1Q8N6C5 1336 aa12.29□□□□□ -0.44
LINC00520-204ENST00000556417 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
LINC00520-204ENST00000556417 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
LINC00520-204ENST00000556417 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
LINC00520-204ENST00000556417 PANK3Q9H999 370 aa12.28□□□□□ -0.44
LINC00520-204ENST00000556417 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
LINC00520-204ENST00000556417 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
LINC00520-204ENST00000556417 WWC3Q9ULE0 1092 aa12.27□□□□□ -0.45
LINC00520-204ENST00000556417 UBR3Q6ZT12 1888 aa12.26□□□□□ -0.45
LINC00520-204ENST00000556417 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
LINC00520-204ENST00000556417 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC00520-204ENST00000556417 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
LINC00520-204ENST00000556417 ADCY9O60503 1353 aa12.26□□□□□ -0.45
LINC00520-204ENST00000556417 KDRP35968 1356 aa12.26□□□□□ -0.45
LINC00520-204ENST00000556417 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 MMP10P09238 476 aa12.25□□□□□ -0.45
LINC00520-204ENST00000556417 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
LINC00520-204ENST00000556417 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 GPBP1L1Q9HC44 474 aaPredicted RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
LINC00520-204ENST00000556417 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
LINC00520-204ENST00000556417 RC3H1Q5TC82 1133 aaKnown RBP12.24□□□□□ -0.45
LINC00520-204ENST00000556417 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
LINC00520-204ENST00000556417 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
LINC00520-204ENST00000556417 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
LINC00520-204ENST00000556417 CABP4P57796 275 aa12.23□□□□□ -0.45
LINC00520-204ENST00000556417 ZNF526Q8TF50 670 aaPredicted RBP12.23□□□□□ -0.45
LINC00520-204ENST00000556417 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 RPS6KA4O75676 772 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 GYS1P13807 737 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 MTHFSP49914 203 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 TGFB2P61812 414 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
LINC00520-204ENST00000556417 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
LINC00520-204ENST00000556417 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
LINC00520-204ENST00000556417 RFC4P35249 363 aa12.21□□□□□ -0.45
LINC00520-204ENST00000556417 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
LINC00520-204ENST00000556417 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
LINC00520-204ENST00000556417 IL13P35225 146 aa12.2□□□□□ -0.46
LINC00520-204ENST00000556417 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
LINC00520-204ENST00000556417 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
LINC00520-204ENST00000556417 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
LINC00520-204ENST00000556417 CCDC87Q9NVE4 849 aa12.19□□□□□ -0.46
LINC00520-204ENST00000556417 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
LINC00520-204ENST00000556417 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
LINC00520-204ENST00000556417 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
LINC00520-204ENST00000556417 KIF3CO14782 793 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 DPEP1P16444 411 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 HSPA6P17066 643 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 KCNA3P22001 575 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 CRKLP46109 303 aaKnown RBP12.18□□□□□ -0.46
LINC00520-204ENST00000556417 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 ZNF831Q5JPB2 1677 aa12.18□□□□□ -0.46
LINC00520-204ENST00000556417 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
LINC00520-204ENST00000556417 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
LINC00520-204ENST00000556417 FKBP8Q14318 412 aa12.16□□□□□ -0.46
LINC00520-204ENST00000556417 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
LINC00520-204ENST00000556417 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
LINC00520-204ENST00000556417 ARHGAP27Q6ZUM4 889 aa12.16□□□□□ -0.46
LINC00520-204ENST00000556417 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
LINC00520-204ENST00000556417 KIAA1551Q9HCM1 1747 aa12.16□□□□□ -0.46
LINC00520-204ENST00000556417 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
LINC00520-204ENST00000556417 COL5A3P25940 1745 aaPredicted RBP12.15□□□□□ -0.46
LINC00520-204ENST00000556417 FCHSD2O94868 740 aa12.15□□□□□ -0.46
LINC00520-204ENST00000556417 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
LINC00520-204ENST00000556417 TM4SF1P30408 202 aa12.14□□□□□ -0.47
LINC00520-204ENST00000556417 DDR1Q08345 913 aa12.14□□□□□ -0.47
LINC00520-204ENST00000556417 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
LINC00520-204ENST00000556417 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
LINC00520-204ENST00000556417 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
LINC00520-204ENST00000556417 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
LINC00520-204ENST00000556417 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
LINC00520-204ENST00000556417 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
LINC00520-204ENST00000556417 POLRMTO00411 1230 aaKnown RBP12.12□□□□□ -0.47
LINC00520-204ENST00000556417 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
LINC00520-204ENST00000556417 TOMM70O94826 608 aa12.12□□□□□ -0.47
LINC00520-204ENST00000556417 HMOX1P09601 288 aa12.12□□□□□ -0.47
LINC00520-204ENST00000556417 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
LINC00520-204ENST00000556417 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
LINC00520-204ENST00000556417 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
LINC00520-204ENST00000556417 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
LINC00520-204ENST00000556417 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
LINC00520-204ENST00000556417 CHRNA5P30532 468 aa12.11□□□□□ -0.47
LINC00520-204ENST00000556417 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
LINC00520-204ENST00000556417 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
LINC00520-204ENST00000556417 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
LINC00520-204ENST00000556417 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
LINC00520-204ENST00000556417 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
LINC00520-204ENST00000556417 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
LINC00520-204ENST00000556417 PCNTO95613 3336 aa12.1□□□□□ -0.47
LINC00520-204ENST00000556417 ZPR1O75312 459 aa12.1□□□□□ -0.47
LINC00520-204ENST00000556417 TJP1Q07157 1748 aa12.1□□□□□ -0.47
LINC00520-204ENST00000556417 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
LINC00520-204ENST00000556417 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
LINC00520-204ENST00000556417 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
LINC00520-204ENST00000556417 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms