RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
MTHFD1-213ENST00000556284 DDB1Q16531 1140 aa13.19□□□□□ -0.3
MTHFD1-213ENST00000556284 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 RGL2O15211 777 aa13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 CYP27B1O15528 508 aa13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 PHKG2P15735 406 aa13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 RXRBP28702 533 aa13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-213ENST00000556284 GLI3P10071 1580 aa13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
MTHFD1-213ENST00000556284 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 A0A0G2JS52 829 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 MYT1Q01538 1121 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 SEPT12Q8IYM1 358 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-213ENST00000556284 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 PYGBP11216 843 aa13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
MTHFD1-213ENST00000556284 ZNF521Q96K83 1311 aa13.14□□□□□ -0.31
MTHFD1-213ENST00000556284 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
MTHFD1-213ENST00000556284 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 MCM10Q7L590 875 aa13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 IL16Q14005 1332 aa13.13□□□□□ -0.31
MTHFD1-213ENST00000556284 THSD7AQ9UPZ6 1657 aa13.12□□□□□ -0.31
MTHFD1-213ENST00000556284 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
MTHFD1-213ENST00000556284 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
MTHFD1-213ENST00000556284 WNK3Q9BYP7 1800 aa13.11□□□□□ -0.31
MTHFD1-213ENST00000556284 CEMIPQ8WUJ3 1361 aa13.11□□□□□ -0.31
MTHFD1-213ENST00000556284 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
MTHFD1-213ENST00000556284 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-213ENST00000556284 TEFQ10587 303 aa13.1□□□□□ -0.31
MTHFD1-213ENST00000556284 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-213ENST00000556284 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
MTHFD1-213ENST00000556284 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
MTHFD1-213ENST00000556284 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
MTHFD1-213ENST00000556284 E9PSI1 815 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 BCL9O00512 1426 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 KDM6AO15550 1401 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 CABP4P57796 275 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
MTHFD1-213ENST00000556284 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
MTHFD1-213ENST00000556284 GNAI1P63096 354 aa13.08□□□□□ -0.32
MTHFD1-213ENST00000556284 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-213ENST00000556284 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
MTHFD1-213ENST00000556284 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 CHL1O00533 1208 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 MYH16Q9H6N6 1097 aa13.07□□□□□ -0.32
MTHFD1-213ENST00000556284 DLG5Q8TDM6 1919 aa13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-213ENST00000556284 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
MTHFD1-213ENST00000556284 RGS12O14924 1447 aa13.05□□□□□ -0.32
MTHFD1-213ENST00000556284 BTBD11A6QL63 1104 aa13.05□□□□□ -0.32
MTHFD1-213ENST00000556284 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
MTHFD1-213ENST00000556284 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
MTHFD1-213ENST00000556284 MRC1P22897 1456 aa13.04□□□□□ -0.32
MTHFD1-213ENST00000556284 PIGBQ92521 554 aa13.04□□□□□ -0.32
MTHFD1-213ENST00000556284 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
MTHFD1-213ENST00000556284 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
MTHFD1-213ENST00000556284 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
MTHFD1-213ENST00000556284 FAM182BQ5T319 152 aa13.03□□□□□ -0.32
MTHFD1-213ENST00000556284 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
MTHFD1-213ENST00000556284 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
MTHFD1-213ENST00000556284 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
MTHFD1-213ENST00000556284 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
MTHFD1-213ENST00000556284 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
MTHFD1-213ENST00000556284 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
MTHFD1-213ENST00000556284 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
MTHFD1-213ENST00000556284 HAX1O00165 279 aa13.01□□□□□ -0.33
MTHFD1-213ENST00000556284 KCNQ2O43526 872 aa13.01□□□□□ -0.33
MTHFD1-213ENST00000556284 TTC5Q8N0Z6 440 aa13.01□□□□□ -0.33
MTHFD1-213ENST00000556284 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
MTHFD1-213ENST00000556284 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
MTHFD1-213ENST00000556284 SLC39A6Q13433 755 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms