RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 RC3H1Q5TC82 1133 aaKnown RBP6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 TRIM52Q96A61 297 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 CDK15Q96Q40 435 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 TSPAN10Q9H1Z9 355 aaPredicted RBP6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 LOC105371045A0A1W2PR82 267 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 FAM13AO94988 1023 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 GGCXP38435 758 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 RPIAP49247 311 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 ZNF784Q8NCA9 323 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 ETNK1Q9HBU6 452 aa6.59□□□□□ -1.35
SPTLC2-204ENST00000556264 EPHA4P54764 986 aa6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 MYT1Q01538 1121 aa6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 TBCELQ5QJ74 424 aa6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 SLC4A9Q96Q91 983 aa6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.58□□□□□ -1.36
SPTLC2-204ENST00000556264 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 LILRA1O75019 489 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 GNRH1P01148 92 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 NPR3P17342 541 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 PPP1R26Q5T8A7 1209 aaPredicted RBP6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 C16orf46Q6P387 395 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
SPTLC2-204ENST00000556264 ITGBL1O95965 494 aaPredicted RBP6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 MPSTP25325 297 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 EAPPQ56P03 285 aaPredicted RBP6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 PPP1R18Q6NYC8 613 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 CYP2U1Q7Z449 544 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 CCDC116Q8IYX3 515 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 RGL4Q8IZJ4 473 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 USP35Q9P2H5 1018 aa6.56□□□□□ -1.36
SPTLC2-204ENST00000556264 A6NJY4 79 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 SIAH2O43255 324 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 ADH1CP00326 375 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 SMTNP53814 917 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 FOXK2Q01167 660 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 COL19A1Q14993 1142 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 ESCO1Q5FWF5 840 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 CDAN1Q8IWY9 1227 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 MPNDQ8N594 471 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 C2orf49Q9BVC5 232 aaPredicted RBP6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 RAB6BQ9NRW1 208 aa6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 SCHIP1Q9P0W5 487 aaPredicted RBP6.55□□□□□ -1.36
SPTLC2-204ENST00000556264 NDUFB5O43674 189 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 TCF3P15923 654 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 VAMP1P23763 118 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 NR5A1Q13285 461 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 AAMPQ13685 434 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 COX20Q5RI15 118 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 TMC7Q7Z402 723 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 TMC1Q8TDI8 760 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 RBCK1Q9BYM8 510 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 HCSTQ9UBK5 93 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 BRPF3Q9ULD4 1205 aa6.54□□□□□ -1.36
SPTLC2-204ENST00000556264 NR3C2P08235 984 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 EIF1AXP47813 144 aaKnown RBP6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 MTFR1Q15390 333 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 STAG2Q8N3U4 1231 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 XAGE2Q96GT9 111 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 ARHGEF10LQ9HCE6 1279 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 CCDC87Q9NVE4 849 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 PGPEP1Q9NXJ5 209 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 STIM2Q9P246 746 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 SHROOM4Q9ULL8 1493 aa6.53□□□□□ -1.36
SPTLC2-204ENST00000556264 TNFRSF10BO14763 440 aa6.52□□□□□ -1.37
SPTLC2-204ENST00000556264 IL2RAP01589 272 aa6.52□□□□□ -1.37
SPTLC2-204ENST00000556264 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
SPTLC2-204ENST00000556264 BCL11AQ9H165 835 aa6.52□□□□□ -1.37
SPTLC2-204ENST00000556264 CDK2AP1O14519 115 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 FZD6O60353 706 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 PLCB3Q01970 1234 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 TLR1Q15399 786 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 ALKBH2Q6NS38 261 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 CNKSR1Q969H4 720 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 MRGPRX2Q96LB1 330 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 CITED4Q96RK1 184 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 LRFN2Q9ULH4 789 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 CHMP3Q9Y3E7 222 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 EMILIN1Q9Y6C2 1016 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 USP3Q9Y6I4 520 aa6.51□□□□□ -1.37
SPTLC2-204ENST00000556264 WNT7AO00755 349 aa6.5□□□□□ -1.37
SPTLC2-204ENST00000556264 TREHO43280 583 aa6.5□□□□□ -1.37
SPTLC2-204ENST00000556264 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
SPTLC2-204ENST00000556264 EMID1Q96A84 441 aaPredicted RBP6.5□□□□□ -1.37
SPTLC2-204ENST00000556264 ESYT1Q9BSJ8 1104 aa6.5□□□□□ -1.37
SPTLC2-204ENST00000556264 SERTM1A2A2V5 107 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms