RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 ZNF142P52746 1687 aaPredicted RBP14.37□□□□□ -0.11
PRKCH-221ENST00000556245 NFAT5O94916 1531 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
PRKCH-221ENST00000556245 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
PRKCH-221ENST00000556245 ADGRL3Q9HAR2 1447 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
PRKCH-221ENST00000556245 PTMSP20962 102 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 PDE1AP54750 535 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
PRKCH-221ENST00000556245 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PRKCH-221ENST00000556245 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 ESCO1Q5FWF5 840 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
PRKCH-221ENST00000556245 ERC2O15083 957 aa14.34□□□□□ -0.11
PRKCH-221ENST00000556245 HOXB7P09629 217 aa14.34□□□□□ -0.11
PRKCH-221ENST00000556245 PHRF1Q9P1Y6 1649 aaKnown RBP14.33□□□□□ -0.12
PRKCH-221ENST00000556245 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
PRKCH-221ENST00000556245 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.12
PRKCH-221ENST00000556245 NBPF4Q96M43 638 aa14.33□□□□□ -0.12
PRKCH-221ENST00000556245 UBTFL1P0CB47 393 aaPredicted RBP14.33□□□□□ -0.12
PRKCH-221ENST00000556245 ST18O60284 1047 aa14.32□□□□□ -0.12
PRKCH-221ENST00000556245 SRCIN1Q9C0H9 1055 aa14.32□□□□□ -0.12
PRKCH-221ENST00000556245 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
PRKCH-221ENST00000556245 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
PRKCH-221ENST00000556245 IBTKQ9P2D0 1353 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-221ENST00000556245 MED1Q15648 1581 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-221ENST00000556245 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
PRKCH-221ENST00000556245 MX1P20591 662 aa14.32□□□□□ -0.12
PRKCH-221ENST00000556245 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
PRKCH-221ENST00000556245 SKOR2Q2VWA4 1001 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-221ENST00000556245 PLEKHO1Q53GL0 409 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-221ENST00000556245 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
PRKCH-221ENST00000556245 USP44Q9H0E7 712 aa14.31□□□□□ -0.12
PRKCH-221ENST00000556245 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
PRKCH-221ENST00000556245 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
PRKCH-221ENST00000556245 AKAP4Q5JQC9 854 aa14.31□□□□□ -0.12
PRKCH-221ENST00000556245 FSD2A1L4K1 749 aa14.3□□□□□ -0.12
PRKCH-221ENST00000556245 EIF4A1P60842 406 aaKnown RBP14.3□□□□□ -0.12
PRKCH-221ENST00000556245 TEFQ10587 303 aa14.3□□□□□ -0.12
PRKCH-221ENST00000556245 AMOTQ4VCS5 1084 aa14.3□□□□□ -0.12
PRKCH-221ENST00000556245 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
PRKCH-221ENST00000556245 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
PRKCH-221ENST00000556245 GOLGA6L22H0YM25 854 aa14.3□□□□□ -0.12
PRKCH-221ENST00000556245 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
PRKCH-221ENST00000556245 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
PRKCH-221ENST00000556245 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
PRKCH-221ENST00000556245 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
PRKCH-221ENST00000556245 LMO7Q8WWI1 1683 aa14.29□□□□□ -0.12
PRKCH-221ENST00000556245 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
PRKCH-221ENST00000556245 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
PRKCH-221ENST00000556245 STAP2Q9UGK3 403 aa14.29□□□□□ -0.12
PRKCH-221ENST00000556245 NPHP4O75161 1426 aaPredicted RBP14.29□□□□□ -0.12
PRKCH-221ENST00000556245 AOX1Q06278 1338 aa14.29□□□□□ -0.12
PRKCH-221ENST00000556245 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 NUCB2P80303 420 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 NCAPD2Q15021 1401 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
PRKCH-221ENST00000556245 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 GCP02774 474 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 MCCP23508 829 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 C1orf141Q5JVX7 400 aa14.28□□□□□ -0.12
PRKCH-221ENST00000556245 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.12
PRKCH-221ENST00000556245 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.12
PRKCH-221ENST00000556245 SLIT3O75094 1523 aa14.27□□□□□ -0.12
PRKCH-221ENST00000556245 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 SSFA2P28290 1259 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
PRKCH-221ENST00000556245 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
PRKCH-221ENST00000556245 OVOS2A0A0G2JMS6 1433 aa14.26□□□□□ -0.13
PRKCH-221ENST00000556245 MRE11P49959 708 aa14.26□□□□□ -0.13
PRKCH-221ENST00000556245 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
PRKCH-221ENST00000556245 TSHZ3Q63HK5 1081 aa14.26□□□□□ -0.13
PRKCH-221ENST00000556245 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
PRKCH-221ENST00000556245 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRKCH-221ENST00000556245 POLA2Q14181 598 aa14.25□□□□□ -0.13
PRKCH-221ENST00000556245 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
PRKCH-221ENST00000556245 ORAI2Q96SN7 254 aa14.25□□□□□ -0.13
PRKCH-221ENST00000556245 RNMTO43148 476 aaKnown RBP14.25□□□□□ -0.13
PRKCH-221ENST00000556245 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
PRKCH-221ENST00000556245 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 SURF6O75683 361 aaKnown RBP14.24□□□□□ -0.13
PRKCH-221ENST00000556245 CHMLP26374 656 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 MCM2P49736 904 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 FAM43AQ8N2R8 423 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 ANKRD24Q8TF21 1146 aa14.24□□□□□ -0.13
PRKCH-221ENST00000556245 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
PRKCH-221ENST00000556245 ANAPC15P60006 121 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms