RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SLC39A6Q13433 755 aa18■□□□□ 0.47
NEK9-209ENST00000556170 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
NEK9-209ENST00000556170 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
NEK9-209ENST00000556170 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
NEK9-209ENST00000556170 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 MROH1Q8NDA8 1641 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 PNMA6EA0A0J9YXQ4 647 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
NEK9-209ENST00000556170 RUFY2Q8WXA3 655 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 DIP2CQ9Y2E4 1556 aa17.99■□□□□ 0.47
NEK9-209ENST00000556170 AACSQ86V21 672 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 GRPEL1Q9HAV7 217 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 PTPRMP28827 1452 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 ZKSCAN1P17029 563 aaPredicted RBP17.98■□□□□ 0.47
NEK9-209ENST00000556170 EVA1CP58658 441 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 IL17REQ8NFR9 667 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 ARID3AQ99856 593 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
NEK9-209ENST00000556170 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 FRMPD1Q5SYB0 1578 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
NEK9-209ENST00000556170 DTNBO60941 627 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
NEK9-209ENST00000556170 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 ANKRD24Q8TF21 1146 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
NEK9-209ENST00000556170 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
NEK9-209ENST00000556170 MAP3K2Q9Y2U5 619 aa17.97■□□□□ 0.47
NEK9-209ENST00000556170 CD2BP2O95400 341 aaKnown RBP17.96■□□□□ 0.47
NEK9-209ENST00000556170 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
NEK9-209ENST00000556170 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
NEK9-209ENST00000556170 KCNQ3O43525 872 aa17.96■□□□□ 0.47
NEK9-209ENST00000556170 NASPP49321 788 aaPredicted RBP17.96■□□□□ 0.47
NEK9-209ENST00000556170 ZGPATQ8N5A5 531 aaKnown RBP17.96■□□□□ 0.47
NEK9-209ENST00000556170 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
NEK9-209ENST00000556170 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
NEK9-209ENST00000556170 MPNDQ8N594 471 aa17.96■□□□□ 0.46
NEK9-209ENST00000556170 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.46
NEK9-209ENST00000556170 CAMSAP1Q5T5Y3 1602 aa17.95■□□□□ 0.46
NEK9-209ENST00000556170 KIF1BPQ96EK5 621 aa17.95■□□□□ 0.46
NEK9-209ENST00000556170 DNAJC2Q99543 621 aaKnown RBP17.95■□□□□ 0.46
NEK9-209ENST00000556170 FOSBP53539 338 aa17.95■□□□□ 0.46
NEK9-209ENST00000556170 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
NEK9-209ENST00000556170 GCP02774 474 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
NEK9-209ENST00000556170 ATP8B2P98198 1209 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 CWF19L2Q2TBE0 894 aaKnown RBP17.94■□□□□ 0.46
NEK9-209ENST00000556170 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
NEK9-209ENST00000556170 ATP7BP35670 1465 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 XRCC6P12956 609 aaKnown RBP eCLIP17.94■□□□□ 0.46
NEK9-209ENST00000556170 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
NEK9-209ENST00000556170 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 ARHGEF40Q8TER5 1519 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 DDX17Q92841 729 aaKnown RBP17.93■□□□□ 0.46
NEK9-209ENST00000556170 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
NEK9-209ENST00000556170 BOLA2Q9H3K6 86 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 SNX21Q969T3 373 aa17.93■□□□□ 0.46
NEK9-209ENST00000556170 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
NEK9-209ENST00000556170 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
NEK9-209ENST00000556170 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
NEK9-209ENST00000556170 FIBPO43427 364 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 CABP4P57796 275 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 PIK3C2BO00750 1634 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
NEK9-209ENST00000556170 MYD88Q99836 296 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
NEK9-209ENST00000556170 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 STK3Q13188 491 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
NEK9-209ENST00000556170 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
NEK9-209ENST00000556170 IP6K1Q92551 441 aa17.89■□□□□ 0.46
NEK9-209ENST00000556170 ESYT1Q9BSJ8 1104 aa17.89■□□□□ 0.46
NEK9-209ENST00000556170 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.46
NEK9-209ENST00000556170 LRRC7Q96NW7 1537 aa17.89■□□□□ 0.45
NEK9-209ENST00000556170 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
NEK9-209ENST00000556170 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
NEK9-209ENST00000556170 USP6P35125 1406 aa17.89■□□□□ 0.45
NEK9-209ENST00000556170 TMX3Q96JJ7 454 aa17.89■□□□□ 0.45
NEK9-209ENST00000556170 CASTP20810 708 aaKnown RBP17.89■□□□□ 0.45
NEK9-209ENST00000556170 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
NEK9-209ENST00000556170 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms