RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
CHMP4BP1-201ENST00000556017 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
CHMP4BP1-201ENST00000556017 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
CHMP4BP1-201ENST00000556017 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
CHMP4BP1-201ENST00000556017 ATP10DQ9P241 1426 aa19.86■□□□□ 0.77
CHMP4BP1-201ENST00000556017 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
CHMP4BP1-201ENST00000556017 HMGB2P26583 209 aaKnown RBP19.86■□□□□ 0.77
CHMP4BP1-201ENST00000556017 C4AP0C0L4 1744 aa19.85■□□□□ 0.77
CHMP4BP1-201ENST00000556017 CICQ96RK0 1608 aaPredicted RBP19.84■□□□□ 0.77
CHMP4BP1-201ENST00000556017 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
CHMP4BP1-201ENST00000556017 ATP6V1AP38606 617 aa19.84■□□□□ 0.77
CHMP4BP1-201ENST00000556017 N4BP2Q86UW6 1770 aaPredicted RBP19.84■□□□□ 0.77
CHMP4BP1-201ENST00000556017 GNPATO15228 680 aa19.83■□□□□ 0.77
CHMP4BP1-201ENST00000556017 PANK3Q9H999 370 aa19.83■□□□□ 0.77
CHMP4BP1-201ENST00000556017 BRCA1P38398 1863 aaKnown RBP19.82■□□□□ 0.76
CHMP4BP1-201ENST00000556017 POLR3GLQ9BT43 218 aa19.82■□□□□ 0.76
CHMP4BP1-201ENST00000556017 WWC3Q9ULE0 1092 aa19.82■□□□□ 0.76
CHMP4BP1-201ENST00000556017 ERVV-2B6SEH9 535 aa19.81■□□□□ 0.76
CHMP4BP1-201ENST00000556017 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
CHMP4BP1-201ENST00000556017 PXDNLA1KZ92 1463 aa19.8■□□□□ 0.76
CHMP4BP1-201ENST00000556017 TJP1Q07157 1748 aa19.8■□□□□ 0.76
CHMP4BP1-201ENST00000556017 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
CHMP4BP1-201ENST00000556017 SCN11AQ9UI33 1791 aa19.8■□□□□ 0.76
CHMP4BP1-201ENST00000556017 DCAF5Q96JK2 942 aa19.79■□□□□ 0.76
CHMP4BP1-201ENST00000556017 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
CHMP4BP1-201ENST00000556017 MMP10P09238 476 aa19.78■□□□□ 0.76
CHMP4BP1-201ENST00000556017 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
CHMP4BP1-201ENST00000556017 C10orf71Q711Q0 1435 aa19.77■□□□□ 0.76
CHMP4BP1-201ENST00000556017 VIRMAQ69YN4 1812 aaKnown RBP19.77■□□□□ 0.76
CHMP4BP1-201ENST00000556017 RC3H1Q5TC82 1133 aaKnown RBP19.77■□□□□ 0.76
CHMP4BP1-201ENST00000556017 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
CHMP4BP1-201ENST00000556017 ZNF530Q6P9A1 599 aaPredicted RBP19.76■□□□□ 0.75
CHMP4BP1-201ENST00000556017 ARHGEF1Q92888 912 aaKnown RBP19.76■□□□□ 0.75
CHMP4BP1-201ENST00000556017 GYS1P13807 737 aa19.75■□□□□ 0.75
CHMP4BP1-201ENST00000556017 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
CHMP4BP1-201ENST00000556017 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
CHMP4BP1-201ENST00000556017 RBM42Q9BTD8 480 aaKnown RBP19.74■□□□□ 0.75
CHMP4BP1-201ENST00000556017 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
CHMP4BP1-201ENST00000556017 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
CHMP4BP1-201ENST00000556017 HSP90AB1P08238 724 aaKnown RBP19.73■□□□□ 0.75
CHMP4BP1-201ENST00000556017 IL13P35225 146 aa19.73■□□□□ 0.75
CHMP4BP1-201ENST00000556017 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
CHMP4BP1-201ENST00000556017 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
CHMP4BP1-201ENST00000556017 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
CHMP4BP1-201ENST00000556017 A0A0G2JLW4 131 aa19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 ADRA2BP18089 450 aa19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 MORC1Q86VD1 984 aa19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 NLGN1Q8N2Q7 840 aa19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 ZNF526Q8TF50 670 aaPredicted RBP19.71■□□□□ 0.75
CHMP4BP1-201ENST00000556017 KIF3CO14782 793 aa19.7■□□□□ 0.74
CHMP4BP1-201ENST00000556017 KCNA3P22001 575 aa19.7■□□□□ 0.74
CHMP4BP1-201ENST00000556017 CABP4P57796 275 aa19.7■□□□□ 0.74
CHMP4BP1-201ENST00000556017 TGFB2P61812 414 aa19.7■□□□□ 0.74
CHMP4BP1-201ENST00000556017 SULT6B1Q6IMI4 303 aa19.7■□□□□ 0.74
CHMP4BP1-201ENST00000556017 PTCD1O75127 700 aaKnown RBP19.69■□□□□ 0.74
CHMP4BP1-201ENST00000556017 MTHFSP49914 203 aa19.69■□□□□ 0.74
CHMP4BP1-201ENST00000556017 MRC1P22897 1456 aa19.68■□□□□ 0.74
CHMP4BP1-201ENST00000556017 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
CHMP4BP1-201ENST00000556017 SRP68Q9UHB9 627 aaKnown RBP19.68■□□□□ 0.74
CHMP4BP1-201ENST00000556017 DPEP1P16444 411 aa19.67■□□□□ 0.74
CHMP4BP1-201ENST00000556017 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
CHMP4BP1-201ENST00000556017 DDR1Q08345 913 aa19.66■□□□□ 0.74
CHMP4BP1-201ENST00000556017 LGR6Q9HBX8 967 aa19.66■□□□□ 0.74
CHMP4BP1-201ENST00000556017 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
CHMP4BP1-201ENST00000556017 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
CHMP4BP1-201ENST00000556017 HSPA6P17066 643 aa19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 RFC4P35249 363 aa19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 FKBP8Q14318 412 aa19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 C1orf141Q5JVX7 400 aa19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 UBR2Q8IWV8 1755 aa19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
CHMP4BP1-201ENST00000556017 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
CHMP4BP1-201ENST00000556017 BCS1LQ9Y276 419 aa19.64■□□□□ 0.73
CHMP4BP1-201ENST00000556017 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
CHMP4BP1-201ENST00000556017 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
CHMP4BP1-201ENST00000556017 SBF1O95248 1867 aa19.64■□□□□ 0.73
CHMP4BP1-201ENST00000556017 NRXN2Q9P2S2 1712 aa19.63■□□□□ 0.73
CHMP4BP1-201ENST00000556017 CCDC87Q9NVE4 849 aa19.63■□□□□ 0.73
CHMP4BP1-201ENST00000556017 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
CHMP4BP1-201ENST00000556017 SLC52A2Q9HAB3 445 aa19.62■□□□□ 0.73
CHMP4BP1-201ENST00000556017 TM4SF1P30408 202 aa19.61■□□□□ 0.73
CHMP4BP1-201ENST00000556017 AKAP4Q5JQC9 854 aa19.61■□□□□ 0.73
CHMP4BP1-201ENST00000556017 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
CHMP4BP1-201ENST00000556017 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
CHMP4BP1-201ENST00000556017 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 POLRMTO00411 1230 aaKnown RBP19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 RNMTO43148 476 aaKnown RBP19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 FCHSD2O94868 740 aa19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 HMOX1P09601 288 aa19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 CYP19A1P11511 503 aaPredicted RBP19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 SLC39A6Q13433 755 aa19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 SIPA1L3O60292 1781 aaPredicted RBP19.59■□□□□ 0.73
CHMP4BP1-201ENST00000556017 DLEC1Q9Y238 1755 aa19.58■□□□□ 0.73
CHMP4BP1-201ENST00000556017 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.72
CHMP4BP1-201ENST00000556017 ARHGAP27Q6ZUM4 889 aa19.58■□□□□ 0.72
CHMP4BP1-201ENST00000556017 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
CHMP4BP1-201ENST00000556017 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
CHMP4BP1-201ENST00000556017 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms