RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 FLIIQ13045 1269 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 G2E3Q7L622 706 aa12.68□□□□□ -0.38
EFCAB11-209ENST00000556005 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
EFCAB11-209ENST00000556005 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
EFCAB11-209ENST00000556005 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
EFCAB11-209ENST00000556005 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
EFCAB11-209ENST00000556005 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
EFCAB11-209ENST00000556005 COL18A1P39060 1754 aa12.65□□□□□ -0.39
EFCAB11-209ENST00000556005 F6X3S4 739 aa12.64□□□□□ -0.39
EFCAB11-209ENST00000556005 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
EFCAB11-209ENST00000556005 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 MEIS3Q99687 375 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 LNPKQ9C0E8 428 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
EFCAB11-209ENST00000556005 KDM3BQ7LBC6 1761 aa12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 KCNQ3O43525 872 aa12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 PHKG2P15735 406 aa12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
EFCAB11-209ENST00000556005 HMMRO75330 724 aa12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 GNAI3P08754 354 aa12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 GNAI2P04899 355 aa12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-209ENST00000556005 DCAF5Q96JK2 942 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 MEGF6O75095 1541 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
EFCAB11-209ENST00000556005 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-209ENST00000556005 ADAMTS7Q9UKP4 1686 aa12.59□□□□□ -0.39
EFCAB11-209ENST00000556005 SEC24BO95487 1268 aa12.59□□□□□ -0.39
EFCAB11-209ENST00000556005 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
EFCAB11-209ENST00000556005 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
EFCAB11-209ENST00000556005 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
EFCAB11-209ENST00000556005 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
EFCAB11-209ENST00000556005 CYP27B1O15528 508 aa12.57□□□□□ -0.4
EFCAB11-209ENST00000556005 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
EFCAB11-209ENST00000556005 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-209ENST00000556005 KDM6AO15550 1401 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-209ENST00000556005 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
EFCAB11-209ENST00000556005 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 EVA1CP58658 441 aa12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
EFCAB11-209ENST00000556005 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 TTC5Q8N0Z6 440 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 CABP4P57796 275 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
EFCAB11-209ENST00000556005 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 IL2RBP14784 551 aa12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
EFCAB11-209ENST00000556005 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 ANXA1P04083 346 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 KSR2Q6VAB6 950 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 PLEKHM2Q8IWE5 1019 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 MRC1P22897 1456 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-209ENST00000556005 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
EFCAB11-209ENST00000556005 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms