RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 MX2P20592 715 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 TMEM214Q6NUQ4 689 aaKnown RBP3.76□□□□□ -1.81
NEK9-208ENST00000555961 NBPF10Q6P3W6 841 aaKnown RBP3.76□□□□□ -1.81
NEK9-208ENST00000555961 PGBD3Q8N328 593 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 NBPF15Q8N660 670 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 MTMR14Q8NCE2 650 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 NEDD1Q8NHV4 660 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 WHAMMQ8TF30 809 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 GTPBP3Q969Y2 492 aaKnown RBP3.76□□□□□ -1.81
NEK9-208ENST00000555961 NUCKS1Q9H1E3 243 aaKnown RBP3.76□□□□□ -1.81
NEK9-208ENST00000555961 PHF24Q9UPV7 400 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 IGF1RP08069 1367 aa3.76□□□□□ -1.81
NEK9-208ENST00000555961 SPATA31C2B4DYI2 1134 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 K7ELQ4 463 aaPredicted RBP3.75□□□□□ -1.81
NEK9-208ENST00000555961 GPR25O00155 361 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 ARHGEF15O94989 841 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 F11P03951 625 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 CELA2BP08218 269 aaPredicted RBP3.75□□□□□ -1.81
NEK9-208ENST00000555961 BCRP11274 1271 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 SCTRP47872 440 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 SLFNL1Q499Z3 407 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 CNKSR1Q969H4 720 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 SIRT1Q96EB6 747 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 ZSCAN10Q96SZ4 725 aaPredicted RBP3.75□□□□□ -1.81
NEK9-208ENST00000555961 GRIP2Q9C0E4 1043 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 OSBPL3Q9H4L5 887 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 RAB6BQ9NRW1 208 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 CUEDC1Q9NWM3 386 aaPredicted RBP3.75□□□□□ -1.81
NEK9-208ENST00000555961 DOLKQ9UPQ8 538 aa3.75□□□□□ -1.81
NEK9-208ENST00000555961 MSTNO14793 375 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 TRAK2O60296 914 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 MAP2K3P46734 347 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 USP4Q13107 963 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 GAS6Q14393 721 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 DBN1Q16643 649 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 LYPD4Q6UWN0 246 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 RNF135Q8IUD6 432 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 BEND7Q8N7W2 519 aaPredicted RBP3.74□□□□□ -1.81
NEK9-208ENST00000555961 ESYT1Q9BSJ8 1104 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 GPAMQ9HCL2 828 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 SNRKQ9NRH2 765 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 CEP126Q9P2H0 1117 aa3.74□□□□□ -1.81
NEK9-208ENST00000555961 A0A1B0GTH6 734 aa3.73□□□□□ -1.81
NEK9-208ENST00000555961 PHKA2P46019 1235 aa3.73□□□□□ -1.81
NEK9-208ENST00000555961 CENPCQ03188 943 aa3.73□□□□□ -1.81
NEK9-208ENST00000555961 OXLD1Q5BKU9 147 aa3.73□□□□□ -1.81
NEK9-208ENST00000555961 EFHC2Q5JST6 749 aa3.73□□□□□ -1.81
NEK9-208ENST00000555961 IL2RAP01589 272 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 LBRQ14739 615 aaKnown RBP3.72□□□□□ -1.81
NEK9-208ENST00000555961 TLR1Q15399 786 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 WASHC4Q2M389 1173 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 WWC1Q8IX03 1113 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 CFHR5Q9BXR6 569 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 TBC1D2BQ9UPU7 963 aa3.72□□□□□ -1.81
NEK9-208ENST00000555961 PIK3R2O00459 728 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 BMP4P12644 408 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 ABL2P42684 1182 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 SEMA3FQ13275 785 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 TBC1D9Q6ZT07 1266 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 RHBDD1Q8TEB9 315 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 XAGE2Q96GT9 111 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 CCDC85AQ96PX6 553 aaPredicted RBP3.71□□□□□ -1.82
NEK9-208ENST00000555961 CDCA7Q9BWT1 371 aaPredicted RBP3.71□□□□□ -1.82
NEK9-208ENST00000555961 OXCT2Q9BYC2 517 aaPredicted RBP3.71□□□□□ -1.82
NEK9-208ENST00000555961 RRAGCQ9HB90 399 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 LRRC4BQ9NT99 713 aa3.71□□□□□ -1.82
NEK9-208ENST00000555961 GDF2Q9UK05 429 aaPredicted RBP3.71□□□□□ -1.82
NEK9-208ENST00000555961 AMPD1P23109 780 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 MSX1P28360 303 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 SOX11P35716 441 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 PLA2G4AP47712 749 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 MAP7D1Q3KQU3 841 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 C4orf17Q53FE4 359 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 FIGNL1Q6PIW4 674 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 GOLGA6L1Q8N7Z2 621 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 GALNT6Q8NCL4 622 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 ACDQ96AP0 544 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 RUBCNLQ9H714 662 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 ATXN7L1Q9ULK2 861 aaPredicted RBP3.7□□□□□ -1.82
NEK9-208ENST00000555961 GTF3C3Q9Y5Q9 886 aa3.7□□□□□ -1.82
NEK9-208ENST00000555961 OIP5O43482 229 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 GPR37L1O60883 481 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 YBX3P16989 372 aaKnown RBP eCLIP3.69□□□□□ -1.82
NEK9-208ENST00000555961 TATP17735 454 aaPredicted RBP3.69□□□□□ -1.82
NEK9-208ENST00000555961 VAC14Q08AM6 782 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 NBPF1Q3BBV0 1214 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 PPARGC1BQ86YN6 1023 aaKnown RBP3.69□□□□□ -1.82
NEK9-208ENST00000555961 C1orf216Q8TAB5 229 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 AIDAQ96BJ3 306 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 NIFKQ9BYG3 293 aaKnown RBP3.69□□□□□ -1.82
NEK9-208ENST00000555961 FHDC1Q9C0D6 1143 aaPredicted RBP3.69□□□□□ -1.82
NEK9-208ENST00000555961 ETNK1Q9HBU6 452 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 GDPD2Q9HCC8 539 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 MKL2Q9ULH7 1088 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 GJA3Q9Y6H8 435 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 CNTNAP5Q8WYK1 1306 aa3.69□□□□□ -1.82
NEK9-208ENST00000555961 FGFR3P22607 806 aa3.68□□□□□ -1.82
NEK9-208ENST00000555961 GDF10P55107 478 aa3.68□□□□□ -1.82
NEK9-208ENST00000555961 ARSJQ5FYB0 599 aaPredicted RBP3.68□□□□□ -1.82
NEK9-208ENST00000555961 ALYREFQ86V81 257 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms