RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 RNF223E7ERA6 249 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 INHAP05111 366 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 FSHRP23945 695 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 RPIAP49247 311 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 EPHA4P54764 986 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 NAA30Q147X3 362 aaPredicted RBP4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 RGL4Q8IZJ4 473 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 TNS4Q8IZW8 715 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 EHBP1Q8NDI1 1231 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 CYLDQ9NQC7 956 aa4.82□□□□□ -1.64
MTHFD1-212ENST00000555858 GNRH1P01148 92 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 TCF3P15923 654 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 KCNC4Q03721 635 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 ARID5BQ14865 1188 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 ESCO1Q5FWF5 840 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 PLA2G2CQ5R387 149 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 CYP2U1Q7Z449 544 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 MPNDQ8N594 471 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 SLC4A9Q96Q91 983 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 TSPAN10Q9H1Z9 355 aaPredicted RBP4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 ETNK1Q9HBU6 452 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 TMPRSS4Q9NRS4 437 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 SERTAD1Q9UHV2 236 aa4.81□□□□□ -1.64
MTHFD1-212ENST00000555858 NDUFB5O43674 189 aa4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 CD2BP2O95400 341 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 STAU1O95793 577 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 ITGBL1O95965 494 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 GRM5P41594 1212 aa4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 EAPPQ56P03 285 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 RC3H1Q5TC82 1133 aaKnown RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 C16orf46Q6P387 395 aa4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 STAG2Q8N3U4 1231 aa4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 ZNF784Q8NCA9 323 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 CHMP7Q8WUX9 453 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-212ENST00000555858 LOC105371045A0A1W2PR82 267 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 PPP1R12BO60237 982 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 LILRA1O75019 489 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 MPSTP25325 297 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 FOXK2Q01167 660 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 TAGLNQ01995 201 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 PPP1R26Q5T8A7 1209 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 ALKBH2Q6NS38 261 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 TMC7Q7Z402 723 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 SLC9A9Q8IVB4 645 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 CCDC116Q8IYX3 515 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 CITED4Q96RK1 184 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 C2orf49Q9BVC5 232 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 SCHIP1Q9P0W5 487 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 USP35Q9P2H5 1018 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 BRPF3Q9ULD4 1205 aa4.79□□□□□ -1.64
MTHFD1-212ENST00000555858 A0A1W2PRU2 124 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 A6NJY4 79 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 ADH1CP00326 375 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 SMTNP53814 917 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 PSMA6P60900 246 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 NR5A1Q13285 461 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 MTFR1Q15390 333 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 SAP130Q9H0E3 1048 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 CHMP3Q9Y3E7 222 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 TLL2Q9Y6L7 1015 aa4.78□□□□□ -1.64
MTHFD1-212ENST00000555858 SHROOM4Q9ULL8 1493 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 SIAH2O43255 324 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 TREHO43280 583 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 RECKO95980 971 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 P4HBP07237 508 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 EIF1AXP47813 144 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 FGD1P98174 961 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 FMR1Q06787 632 aaKnown RBP eCLIP4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 COX20Q5RI15 118 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 ABTB2Q8N961 1025 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 MYO19Q96H55 970 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 DMRTB1Q96MA1 342 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 PGPEP1Q9NXJ5 209 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 STIM2Q9P246 746 aa4.77□□□□□ -1.65
MTHFD1-212ENST00000555858 CDK2AP1O14519 115 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 TNFRSF10BO14763 440 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 FZD6O60353 706 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 PDE3BQ13370 1112 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 AAMPQ13685 434 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 TBCELQ5QJ74 424 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 PPP1R18Q6NYC8 613 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 POTEAQ6S8J7 498 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 NBPF15Q8N660 670 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 TMC1Q8TDI8 760 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 XAGE2Q96GT9 111 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 C8orf37Q96NL8 207 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 PRKD2Q9BZL6 878 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 ARHGEF10LQ9HCE6 1279 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 HCSTQ9UBK5 93 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 EMILIN1Q9Y6C2 1016 aa4.76□□□□□ -1.65
MTHFD1-212ENST00000555858 WNT7AO00755 349 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 IL2RAP01589 272 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 NR3C2P08235 984 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 ADD1P35611 737 aaKnown RBP4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 ITGAEP38570 1179 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 PLCB3Q01970 1234 aa4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 MRPL58Q14197 206 aaKnown RBP4.75□□□□□ -1.65
MTHFD1-212ENST00000555858 DSC3Q14574 896 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms