RNA–Protein interactions for RNA: ENST00000555846.1

SOCS4-204, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-204ENST00000555846 SEC24BO95487 1268 aa12.32□□□□□ -0.44
SOCS4-204ENST00000555846 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
SOCS4-204ENST00000555846 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
SOCS4-204ENST00000555846 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
SOCS4-204ENST00000555846 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
SOCS4-204ENST00000555846 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
SOCS4-204ENST00000555846 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
SOCS4-204ENST00000555846 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
SOCS4-204ENST00000555846 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
SOCS4-204ENST00000555846 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
SOCS4-204ENST00000555846 PTPRCP08575 1304 aa12.31□□□□□ -0.44
SOCS4-204ENST00000555846 TSHZ3Q63HK5 1081 aa12.3□□□□□ -0.44
SOCS4-204ENST00000555846 HSCBQ8IWL3 235 aa12.3□□□□□ -0.44
SOCS4-204ENST00000555846 C22orf23Q9BZE7 217 aa12.3□□□□□ -0.44
SOCS4-204ENST00000555846 SRGAP3O43295 1099 aa12.3□□□□□ -0.44
SOCS4-204ENST00000555846 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
SOCS4-204ENST00000555846 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 KIAA0232Q92628 1395 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 USP19O94966 1318 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 SIL1Q9H173 461 aa12.29□□□□□ -0.44
SOCS4-204ENST00000555846 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
SOCS4-204ENST00000555846 PRAMEF22A3QJZ6 481 aa12.28□□□□□ -0.44
SOCS4-204ENST00000555846 NOL8Q76FK4 1167 aaKnown RBP12.28□□□□□ -0.44
SOCS4-204ENST00000555846 MAP3K2Q9Y2U5 619 aa12.28□□□□□ -0.44
SOCS4-204ENST00000555846 KIF20BQ96Q89 1820 aa12.28□□□□□ -0.44
SOCS4-204ENST00000555846 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
SOCS4-204ENST00000555846 MAP4K4O95819 1239 aaPredicted RBP12.28□□□□□ -0.44
SOCS4-204ENST00000555846 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
SOCS4-204ENST00000555846 NUCB1Q02818 461 aa12.27□□□□□ -0.44
SOCS4-204ENST00000555846 SMC5Q8IY18 1101 aa12.27□□□□□ -0.44
SOCS4-204ENST00000555846 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.44
SOCS4-204ENST00000555846 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
SOCS4-204ENST00000555846 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
SOCS4-204ENST00000555846 ERBB3P21860 1342 aa12.27□□□□□ -0.45
SOCS4-204ENST00000555846 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 KCNJ4P48050 445 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 CWF19L2Q2TBE0 894 aaKnown RBP12.26□□□□□ -0.45
SOCS4-204ENST00000555846 INTS3Q68E01 1043 aaKnown RBP12.26□□□□□ -0.45
SOCS4-204ENST00000555846 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
SOCS4-204ENST00000555846 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 MYD88Q99836 296 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
SOCS4-204ENST00000555846 ABCC4O15439 1325 aa12.25□□□□□ -0.45
SOCS4-204ENST00000555846 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
SOCS4-204ENST00000555846 CDC45O75419 566 aa12.25□□□□□ -0.45
SOCS4-204ENST00000555846 G3BP1Q13283 466 aaKnown RBP eCLIP12.24□□□□□ -0.45
SOCS4-204ENST00000555846 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 CCDC85AQ96PX6 553 aaPredicted RBP12.24□□□□□ -0.45
SOCS4-204ENST00000555846 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 LARP1Q6PKG0 1096 aaKnown RBP12.24□□□□□ -0.45
SOCS4-204ENST00000555846 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
SOCS4-204ENST00000555846 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
SOCS4-204ENST00000555846 IFIT2P09913 472 aaKnown RBP12.23□□□□□ -0.45
SOCS4-204ENST00000555846 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 ANO2Q9NQ90 1003 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 TMOD3Q9NYL9 352 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 LMTK3Q96Q04 1460 aa12.23□□□□□ -0.45
SOCS4-204ENST00000555846 IL2RBP14784 551 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 PHKG2P15735 406 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
SOCS4-204ENST00000555846 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
SOCS4-204ENST00000555846 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
SOCS4-204ENST00000555846 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.45
SOCS4-204ENST00000555846 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
SOCS4-204ENST00000555846 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
SOCS4-204ENST00000555846 NPHP1O15259 732 aa12.21□□□□□ -0.45
SOCS4-204ENST00000555846 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
SOCS4-204ENST00000555846 RGPD8O14715 1765 aaPredicted RBP12.21□□□□□ -0.45
SOCS4-204ENST00000555846 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.46
SOCS4-204ENST00000555846 GIGYF1O75420 1035 aaPredicted RBP12.21□□□□□ -0.46
SOCS4-204ENST00000555846 CLASRPQ8N2M8 674 aaKnown RBP12.21□□□□□ -0.46
SOCS4-204ENST00000555846 PA2G4Q9UQ80 394 aaKnown RBP12.2□□□□□ -0.46
SOCS4-204ENST00000555846 CRB1P82279 1406 aa12.2□□□□□ -0.46
SOCS4-204ENST00000555846 KDRP35968 1356 aa12.2□□□□□ -0.46
SOCS4-204ENST00000555846 AEBP2Q6ZN18 517 aaPredicted RBP12.2□□□□□ -0.46
SOCS4-204ENST00000555846 TBC1D9Q6ZT07 1266 aa12.2□□□□□ -0.46
SOCS4-204ENST00000555846 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
SOCS4-204ENST00000555846 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
SOCS4-204ENST00000555846 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
SOCS4-204ENST00000555846 MCCP23508 829 aa12.19□□□□□ -0.46
SOCS4-204ENST00000555846 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
SOCS4-204ENST00000555846 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms