RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 APAF1O14727 1248 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
PCNX4-210ENST00000555740 CHRNA2Q15822 529 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
PCNX4-210ENST00000555740 PAPPAQ13219 1627 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 HMOX1P09601 288 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
PCNX4-210ENST00000555740 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 TRPC6Q9Y210 931 aa10.25□□□□□ -0.77
PCNX4-210ENST00000555740 IL16Q14005 1332 aa10.24□□□□□ -0.77
PCNX4-210ENST00000555740 KIF12Q96FN5 646 aa10.24□□□□□ -0.77
PCNX4-210ENST00000555740 BCL9LQ86UU0 1499 aa10.24□□□□□ -0.77
PCNX4-210ENST00000555740 ZMYND10O75800 440 aa10.24□□□□□ -0.77
PCNX4-210ENST00000555740 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
PCNX4-210ENST00000555740 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
PCNX4-210ENST00000555740 TOGARAM1Q9Y4F4 1720 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 LMOD3Q0VAK6 560 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.779e-7■□□□□ 9.8
PCNX4-210ENST00000555740 MAP3K5Q99683 1374 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 HTATSF1O43719 755 aaKnown RBP10.23□□□□□ -0.77
PCNX4-210ENST00000555740 NEFMP07197 916 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 WDR63Q8IWG1 891 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 LTV1Q96GA3 475 aaPredicted RBP10.23□□□□□ -0.77
PCNX4-210ENST00000555740 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
PCNX4-210ENST00000555740 TRMT2AQ8IZ69 625 aaKnown RBP10.22□□□□□ -0.77
PCNX4-210ENST00000555740 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
PCNX4-210ENST00000555740 GLI3P10071 1580 aa10.22□□□□□ -0.77
PCNX4-210ENST00000555740 ATRNO75882 1429 aa10.22□□□□□ -0.77
PCNX4-210ENST00000555740 AMOTQ4VCS5 1084 aa10.22□□□□□ -0.77
PCNX4-210ENST00000555740 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
PCNX4-210ENST00000555740 FNBP4Q8N3X1 1017 aaPredicted RBP10.21□□□□□ -0.77
PCNX4-210ENST00000555740 CEMIPQ8WUJ3 1361 aa10.21□□□□□ -0.78
PCNX4-210ENST00000555740 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.78
PCNX4-210ENST00000555740 BTG4Q9NY30 223 aa10.21□□□□□ -0.78
PCNX4-210ENST00000555740 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
PCNX4-210ENST00000555740 FBXO41Q8TF61 875 aa10.2□□□□□ -0.78
PCNX4-210ENST00000555740 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
PCNX4-210ENST00000555740 MTHFSDQ2M296 383 aaKnown RBP10.2□□□□□ -0.78
PCNX4-210ENST00000555740 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
PCNX4-210ENST00000555740 NLRP2Q9NX02 1062 aa10.2□□□□□ -0.78
PCNX4-210ENST00000555740 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
PCNX4-210ENST00000555740 CICQ96RK0 1608 aaPredicted RBP10.19□□□□□ -0.78
PCNX4-210ENST00000555740 E9PSI1 815 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 RIPK4P57078 832 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
PCNX4-210ENST00000555740 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 SLFN5Q08AF3 891 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 PLEKHO1Q53GL0 409 aaPredicted RBP10.19□□□□□ -0.78
PCNX4-210ENST00000555740 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
PCNX4-210ENST00000555740 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
PCNX4-210ENST00000555740 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
PCNX4-210ENST00000555740 KDM6AO15550 1401 aaPredicted RBP10.18□□□□□ -0.78
PCNX4-210ENST00000555740 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
PCNX4-210ENST00000555740 VPS72Q15906 364 aa10.18□□□□□ -0.78
PCNX4-210ENST00000555740 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
PCNX4-210ENST00000555740 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
PCNX4-210ENST00000555740 LAMB4A4D0S4 1761 aa10.18□□□□□ -0.78
PCNX4-210ENST00000555740 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 AKAP4Q5JQC9 854 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 UNC5CLQ8IV45 518 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 RAPGEF4Q8WZA2 1011 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 CDCA7Q9BWT1 371 aaPredicted RBP10.17□□□□□ -0.78
PCNX4-210ENST00000555740 ITGB4P16144 1822 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 BARGINQ6ZT62 677 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 IFT57Q9NWB7 429 aa10.17□□□□□ -0.78
PCNX4-210ENST00000555740 PCDH11XQ9BZA7 1347 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 PCDH11YQ9BZA8 1340 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
PCNX4-210ENST00000555740 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
PCNX4-210ENST00000555740 IL2RBP14784 551 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 DUSP27Q5VZP5 1158 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
PCNX4-210ENST00000555740 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
PCNX4-210ENST00000555740 BABAM1Q9NWV8 329 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 EVA1CP58658 441 aa10.16□□□□□ -0.78
PCNX4-210ENST00000555740 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
PCNX4-210ENST00000555740 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
PCNX4-210ENST00000555740 NHSQ6T4R5 1651 aa10.15□□□□□ -0.78
PCNX4-210ENST00000555740 MYH16Q9H6N6 1097 aa10.15□□□□□ -0.78
PCNX4-210ENST00000555740 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.79
PCNX4-210ENST00000555740 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.79
PCNX4-210ENST00000555740 PHKG2P15735 406 aa10.14□□□□□ -0.79
PCNX4-210ENST00000555740 BCL9O00512 1426 aa10.14□□□□□ -0.79
PCNX4-210ENST00000555740 N4BP2Q86UW6 1770 aaPredicted RBP10.14□□□□□ -0.79
PCNX4-210ENST00000555740 CDCA7LQ96GN5 454 aa10.14□□□□□ -0.79
PCNX4-210ENST00000555740 C5P01031 1676 aa10.14□□□□□ -0.79
PCNX4-210ENST00000555740 HSP90AB1P08238 724 aaKnown RBP10.13□□□□□ -0.79
PCNX4-210ENST00000555740 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
PCNX4-210ENST00000555740 GNAI1P63096 354 aa10.13□□□□□ -0.79
PCNX4-210ENST00000555740 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
PCNX4-210ENST00000555740 CACNA1FO60840 1977 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms