RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
MTHFD1-211ENST00000555709 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 TAF1LQ8IZX4 1826 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 FLT4P35916 1363 aa15.74■□□□□ 0.11
MTHFD1-211ENST00000555709 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
MTHFD1-211ENST00000555709 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.11
MTHFD1-211ENST00000555709 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
MTHFD1-211ENST00000555709 KIF13BQ9NQT8 1826 aa15.7■□□□□ 0.1
MTHFD1-211ENST00000555709 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
MTHFD1-211ENST00000555709 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
MTHFD1-211ENST00000555709 HOXC9P31274 260 aa15.69■□□□□ 0.1
MTHFD1-211ENST00000555709 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
MTHFD1-211ENST00000555709 C4BP0C0L5 1744 aa15.68■□□□□ 0.1
MTHFD1-211ENST00000555709 AMPHP49418 695 aa15.68■□□□□ 0.1
MTHFD1-211ENST00000555709 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
MTHFD1-211ENST00000555709 IP6K1Q92551 441 aa15.68■□□□□ 0.1
MTHFD1-211ENST00000555709 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
MTHFD1-211ENST00000555709 HSP90AB2PQ58FF8 381 aa15.67■□□□□ 0.1
MTHFD1-211ENST00000555709 SMIM5Q71RC9 77 aa15.67■□□□□ 0.1
MTHFD1-211ENST00000555709 KCPQ6ZWJ8 1503 aa15.67■□□□□ 0.1
MTHFD1-211ENST00000555709 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
MTHFD1-211ENST00000555709 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
MTHFD1-211ENST00000555709 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
MTHFD1-211ENST00000555709 BCS1LQ9Y276 419 aa15.66■□□□□ 0.1
MTHFD1-211ENST00000555709 PKD1L3Q7Z443 1732 aa15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 IL13P35225 146 aa15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 EIF4A2Q14240 407 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 ZCRB1Q8TBF4 217 aaKnown RBP15.65■□□□□ 0.1
MTHFD1-211ENST00000555709 RGPD2P0DJD1 1756 aa15.64■□□□□ 0.1
MTHFD1-211ENST00000555709 PALLDQ8WX93 1383 aa15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 MEGF6O75095 1541 aa15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 DIAPH1O60610 1272 aaKnown RBP15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 BRCA1P38398 1863 aaKnown RBP15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 SMC1BQ8NDV3 1235 aa15.64■□□□□ 0.09
MTHFD1-211ENST00000555709 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 NCAPD2Q15021 1401 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 PHF14O94880 888 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 TGFB2P61812 414 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 AK7Q96M32 723 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 RRAGCQ9HB90 399 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 KDM2BQ8NHM5 1336 aa15.63■□□□□ 0.09
MTHFD1-211ENST00000555709 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
MTHFD1-211ENST00000555709 ARFGEF1Q9Y6D6 1849 aa15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 MMP10P09238 476 aa15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 SSFA2P28290 1259 aa15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 WDR43Q15061 677 aaKnown RBP eCLIP15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 LTV1Q96GA3 475 aaPredicted RBP15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 KDRP35968 1356 aa15.6■□□□□ 0.09
MTHFD1-211ENST00000555709 FCHSD2O94868 740 aa15.59■□□□□ 0.09
MTHFD1-211ENST00000555709 DPEP1P16444 411 aa15.59■□□□□ 0.09
MTHFD1-211ENST00000555709 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
MTHFD1-211ENST00000555709 ADAMTS8Q9UP79 889 aa15.59■□□□□ 0.09
MTHFD1-211ENST00000555709 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
MTHFD1-211ENST00000555709 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
MTHFD1-211ENST00000555709 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
MTHFD1-211ENST00000555709 KCNA3P22001 575 aa15.57■□□□□ 0.08
MTHFD1-211ENST00000555709 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
MTHFD1-211ENST00000555709 EYA1Q99502 592 aa15.57■□□□□ 0.08
MTHFD1-211ENST00000555709 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
MTHFD1-211ENST00000555709 PRDM10Q9NQV6 1147 aa15.56■□□□□ 0.08
MTHFD1-211ENST00000555709 SBF1O95248 1867 aa15.56■□□□□ 0.08
MTHFD1-211ENST00000555709 FOXN1O15353 648 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 NBPF6Q5VWK0 638 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 MPRIPQ6WCQ1 1025 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 AEBP1Q8IUX7 1158 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 NBPF4Q96M43 638 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 RNF181Q9P0P0 153 aa15.55■□□□□ 0.08
MTHFD1-211ENST00000555709 ITGB4P16144 1822 aa15.54■□□□□ 0.08
MTHFD1-211ENST00000555709 SMARCC1Q92922 1105 aaPredicted RBP15.54■□□□□ 0.08
MTHFD1-211ENST00000555709 HMOX1P09601 288 aa15.53■□□□□ 0.08
MTHFD1-211ENST00000555709 SULT6B1Q6IMI4 303 aa15.53■□□□□ 0.08
MTHFD1-211ENST00000555709 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
MTHFD1-211ENST00000555709 C4AP0C0L4 1744 aa15.52■□□□□ 0.08
MTHFD1-211ENST00000555709 GNPATO15228 680 aa15.51■□□□□ 0.07
MTHFD1-211ENST00000555709 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
MTHFD1-211ENST00000555709 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
MTHFD1-211ENST00000555709 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
MTHFD1-211ENST00000555709 LOC102724428A0A0B4J2F2 783 aa15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 VEGFAP15692 232 aaPredicted RBP15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 SIK1P57059 783 aa15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 ITPK1Q13572 414 aa15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
MTHFD1-211ENST00000555709 ZC3H4Q9UPT8 1303 aaKnown RBP15.49■□□□□ 0.07
MTHFD1-211ENST00000555709 NLGN1Q8N2Q7 840 aa15.49■□□□□ 0.07
MTHFD1-211ENST00000555709 PIGBQ92521 554 aa15.49■□□□□ 0.07
MTHFD1-211ENST00000555709 CCDC87Q9NVE4 849 aa15.49■□□□□ 0.07
MTHFD1-211ENST00000555709 PIM2Q9P1W9 311 aa15.49■□□□□ 0.07
MTHFD1-211ENST00000555709 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
MTHFD1-211ENST00000555709 CYP27B1O15528 508 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms