RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
LINC00641-202ENST00000555688 TBX22Q9Y458 520 aa10.33□□□□□ -0.76
LINC00641-202ENST00000555688 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
LINC00641-202ENST00000555688 ADAMTSL3P82987 1691 aa10.32□□□□□ -0.76
LINC00641-202ENST00000555688 MTHFSP49914 203 aa10.32□□□□□ -0.76
LINC00641-202ENST00000555688 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
LINC00641-202ENST00000555688 RIMS1Q86UR5 1692 aaKnown RBP10.32□□□□□ -0.76
LINC00641-202ENST00000555688 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.32□□□□□ -0.76
LINC00641-202ENST00000555688 CPSF1Q10570 1443 aaKnown RBP10.32□□□□□ -0.76
LINC00641-202ENST00000555688 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 SH3D19Q5HYK7 790 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 ERICH6BQ5W0A0 696 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 HDGFL2Q7Z4V5 671 aaPredicted RBP10.31□□□□□ -0.76
LINC00641-202ENST00000555688 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
LINC00641-202ENST00000555688 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 ATP7BP35670 1465 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
LINC00641-202ENST00000555688 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 ANKRD26Q9UPS8 1709 aa10.31□□□□□ -0.76
LINC00641-202ENST00000555688 SMAPO00193 183 aa10.3□□□□□ -0.76
LINC00641-202ENST00000555688 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
LINC00641-202ENST00000555688 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
LINC00641-202ENST00000555688 PRR36Q9H6K5 1346 aa10.3□□□□□ -0.76
LINC00641-202ENST00000555688 CEP170BQ9Y4F5 1589 aaPredicted RBP10.3□□□□□ -0.76
LINC00641-202ENST00000555688 SULF1Q8IWU6 871 aa10.29□□□□□ -0.76
LINC00641-202ENST00000555688 CCDC146Q8IYE0 955 aa10.29□□□□□ -0.76
LINC00641-202ENST00000555688 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
LINC00641-202ENST00000555688 ADGRB2O60241 1585 aa10.29□□□□□ -0.76
LINC00641-202ENST00000555688 PPIP5K1Q6PFW1 1433 aa10.29□□□□□ -0.76
LINC00641-202ENST00000555688 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
LINC00641-202ENST00000555688 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
LINC00641-202ENST00000555688 APAF1O14727 1248 aa10.28□□□□□ -0.76
LINC00641-202ENST00000555688 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
LINC00641-202ENST00000555688 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
LINC00641-202ENST00000555688 DIP2AQ14689 1571 aa10.27□□□□□ -0.76
LINC00641-202ENST00000555688 KIF20BQ96Q89 1820 aa10.27□□□□□ -0.76
LINC00641-202ENST00000555688 CD46P15529 392 aa10.27□□□□□ -0.77
LINC00641-202ENST00000555688 DIXDC1Q155Q3 683 aa10.27□□□□□ -0.77
LINC00641-202ENST00000555688 TRMT2AQ8IZ69 625 aaKnown RBP10.26□□□□□ -0.77
LINC00641-202ENST00000555688 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 RCAN3Q9UKA8 241 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 PTCH1Q13635 1447 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 EDC4Q6P2E9 1401 aaKnown RBP10.26□□□□□ -0.77
LINC00641-202ENST00000555688 COL3A1P02461 1466 aaPredicted RBP10.26□□□□□ -0.77
LINC00641-202ENST00000555688 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
LINC00641-202ENST00000555688 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.772e-7■■■□□ 16
LINC00641-202ENST00000555688 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 CFAP53Q96M91 514 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 PPP4R2Q9NY27 417 aa10.26□□□□□ -0.77
LINC00641-202ENST00000555688 AKAP12Q02952 1782 aa10.25□□□□□ -0.77
LINC00641-202ENST00000555688 MON2Q7Z3U7 1717 aa10.25□□□□□ -0.77
LINC00641-202ENST00000555688 XRN1Q8IZH2 1706 aaKnown RBP10.25□□□□□ -0.77
LINC00641-202ENST00000555688 SLFN5Q08AF3 891 aa10.25□□□□□ -0.77
LINC00641-202ENST00000555688 NGEFQ8N5V2 710 aa10.25□□□□□ -0.77
LINC00641-202ENST00000555688 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 TOPAZ1Q8N9V7 1692 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 TK2O00142 265 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 FBLN1P23142 703 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 MYSM1Q5VVJ2 828 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 ANKLE2Q86XL3 938 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 NME9Q86XW9 330 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
LINC00641-202ENST00000555688 IQSEC2Q5JU85 1478 aa10.23□□□□□ -0.77
LINC00641-202ENST00000555688 KCNA6P17658 529 aa10.23□□□□□ -0.77
LINC00641-202ENST00000555688 RRP1P56182 461 aaKnown RBP10.23□□□□□ -0.77
LINC00641-202ENST00000555688 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
LINC00641-202ENST00000555688 MAP2P11137 1827 aaKnown RBP10.22□□□□□ -0.77
LINC00641-202ENST00000555688 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
LINC00641-202ENST00000555688 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
LINC00641-202ENST00000555688 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
LINC00641-202ENST00000555688 TCP11L2Q8N4U5 519 aa10.22□□□□□ -0.77
LINC00641-202ENST00000555688 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
LINC00641-202ENST00000555688 ACEP12821 1306 aa10.22□□□□□ -0.77
LINC00641-202ENST00000555688 ITSN1Q15811 1721 aa10.22□□□□□ -0.77
LINC00641-202ENST00000555688 U2AF1L5P0DN76 240 aaPredicted RBP10.21□□□□□ -0.77
LINC00641-202ENST00000555688 U2AF1Q01081 240 aaKnown RBP eCLIP10.21□□□□□ -0.77
LINC00641-202ENST00000555688 SPIRE2Q8WWL2 714 aa10.21□□□□□ -0.77
LINC00641-202ENST00000555688 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
LINC00641-202ENST00000555688 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.77
LINC00641-202ENST00000555688 CHD2O14647 1828 aaKnown RBP10.21□□□□□ -0.77
LINC00641-202ENST00000555688 BHMG1C9JSJ3 638 aaPredicted RBP10.21□□□□□ -0.78
LINC00641-202ENST00000555688 NBPF3Q9H094 633 aa10.21□□□□□ -0.78
LINC00641-202ENST00000555688 SSH2Q76I76 1423 aa10.21□□□□□ -0.78
LINC00641-202ENST00000555688 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
LINC00641-202ENST00000555688 TTC21BQ7Z4L5 1316 aa10.2□□□□□ -0.78
LINC00641-202ENST00000555688 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
LINC00641-202ENST00000555688 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
LINC00641-202ENST00000555688 NRKQ7Z2Y5 1582 aa10.2□□□□□ -0.78
LINC00641-202ENST00000555688 RGPD8O14715 1765 aaPredicted RBP10.2□□□□□ -0.78
LINC00641-202ENST00000555688 USP6P35125 1406 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1701.3 ms