RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 UNC5CLQ8IV45 518 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 CYP27B1O15528 508 aa12.45□□□□□ -0.42
HNRNPC-220ENST00000555585 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-220ENST00000555585 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-220ENST00000555585 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
HNRNPC-220ENST00000555585 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 BCAR3O75815 825 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 RARSP54136 660 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 USP21Q9UK80 565 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 DISP2A7MBM2 1401 aa12.44□□□□□ -0.42
HNRNPC-220ENST00000555585 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 EXOC5O00471 708 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 PLIN1O60240 522 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 CDCA7Q9BWT1 371 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-220ENST00000555585 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 VAMP4O75379 141 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 CABP4P57796 275 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 VPS72Q15906 364 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 SMC4Q9NTJ3 1288 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 KDM3BQ7LBC6 1761 aa12.42□□□□□ -0.42
HNRNPC-220ENST00000555585 AFF2P51816 1311 aa12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 ALDH1L2Q3SY69 923 aa12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
HNRNPC-220ENST00000555585 DDB1Q16531 1140 aa12.4□□□□□ -0.42
HNRNPC-220ENST00000555585 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
HNRNPC-220ENST00000555585 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
HNRNPC-220ENST00000555585 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
HNRNPC-220ENST00000555585 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-220ENST00000555585 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-220ENST00000555585 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
HNRNPC-220ENST00000555585 A0A0G2JS52 829 aa12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 TCERG1O14776 1098 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 KCNQ3O43525 872 aa12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 EIF4A1P60842 406 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 MYT1Q01538 1121 aa12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 MRC1P22897 1456 aa12.38□□□□□ -0.43
HNRNPC-220ENST00000555585 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 FBXO41Q8TF61 875 aa12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
HNRNPC-220ENST00000555585 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 TRPC5Q9UL62 973 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-220ENST00000555585 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 ATRNO75882 1429 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 GLI3P10071 1580 aa12.35□□□□□ -0.43
HNRNPC-220ENST00000555585 ITGB4P16144 1822 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 MS4A1P11836 297 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 QTRT2Q9H974 415 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
HNRNPC-220ENST00000555585 HOXB7P09629 217 aa12.33□□□□□ -0.44
HNRNPC-220ENST00000555585 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-220ENST00000555585 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-220ENST00000555585 PANK1Q8TE04 598 aa12.33□□□□□ -0.44
HNRNPC-220ENST00000555585 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms