RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
LINC00643-203ENST00000555518 ZNF395Q9H8N7 513 aaPredicted RBP9.84□□□□□ -0.83
LINC00643-203ENST00000555518 ENAMQ9NRM1 1142 aa9.84□□□□□ -0.83
LINC00643-203ENST00000555518 CARMIL2Q6F5E8 1435 aa9.83□□□□□ -0.84
LINC00643-203ENST00000555518 LRRIQ1Q96JM4 1722 aa9.83□□□□□ -0.84
LINC00643-203ENST00000555518 SENP3-EIF4A1A0A087X0R7 540 aa9.82□□□□□ -0.84
LINC00643-203ENST00000555518 ESPNB1AK53 854 aa9.82□□□□□ -0.84
LINC00643-203ENST00000555518 TIAM1Q13009 1591 aa9.82□□□□□ -0.84
LINC00643-203ENST00000555518 CFAP43Q8NDM7 1665 aa9.82□□□□□ -0.84
LINC00643-203ENST00000555518 ERVH48-1M5A8F1 160 aa9.81□□□□□ -0.84
LINC00643-203ENST00000555518 LILRA1O75019 489 aa9.81□□□□□ -0.84
LINC00643-203ENST00000555518 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
LINC00643-203ENST00000555518 FOXR1Q6PIV2 292 aa9.81□□□□□ -0.84
LINC00643-203ENST00000555518 TMPRSS4Q9NRS4 437 aa9.81□□□□□ -0.84
LINC00643-203ENST00000555518 ABCA8O94911 1581 aa9.8□□□□□ -0.84
LINC00643-203ENST00000555518 IRS1P35568 1242 aa9.8□□□□□ -0.84
LINC00643-203ENST00000555518 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
LINC00643-203ENST00000555518 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
LINC00643-203ENST00000555518 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
LINC00643-203ENST00000555518 HECW1Q76N89 1606 aa9.8□□□□□ -0.84
LINC00643-203ENST00000555518 NUP153P49790 1475 aaKnown RBP9.79□□□□□ -0.84
LINC00643-203ENST00000555518 RAPGEF6Q8TEU7 1601 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 GPC1P35052 558 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 RNF144AP50876 292 aaPredicted RBP9.79□□□□□ -0.84
LINC00643-203ENST00000555518 RAB15P59190 212 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
LINC00643-203ENST00000555518 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 PLB1Q6P1J6 1458 aa9.79□□□□□ -0.84
LINC00643-203ENST00000555518 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
LINC00643-203ENST00000555518 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
LINC00643-203ENST00000555518 EPRSP07814 1512 aaKnown RBP9.77□□□□□ -0.84
LINC00643-203ENST00000555518 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
LINC00643-203ENST00000555518 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
LINC00643-203ENST00000555518 LRRC9Q6ZRR7 1453 aa9.77□□□□□ -0.85
LINC00643-203ENST00000555518 MAGI3Q5TCQ9 1506 aa9.77□□□□□ -0.85
LINC00643-203ENST00000555518 PTPRGP23470 1445 aa9.76□□□□□ -0.85
LINC00643-203ENST00000555518 H7C1W4 665 aa9.76□□□□□ -0.85
LINC00643-203ENST00000555518 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
LINC00643-203ENST00000555518 KDF1Q8NAX2 398 aaPredicted RBP9.76□□□□□ -0.85
LINC00643-203ENST00000555518 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
LINC00643-203ENST00000555518 CDK13Q14004 1512 aaKnown RBP9.76□□□□□ -0.85
LINC00643-203ENST00000555518 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
LINC00643-203ENST00000555518 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
LINC00643-203ENST00000555518 MCCD1P59942 119 aaPredicted RBP9.75□□□□□ -0.85
LINC00643-203ENST00000555518 GPAT2Q6NUI2 795 aa9.75□□□□□ -0.85
LINC00643-203ENST00000555518 FAM117AQ9C073 453 aa9.75□□□□□ -0.85
LINC00643-203ENST00000555518 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
LINC00643-203ENST00000555518 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
LINC00643-203ENST00000555518 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
LINC00643-203ENST00000555518 RNF20Q5VTR2 975 aa9.74□□□□□ -0.85
LINC00643-203ENST00000555518 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
LINC00643-203ENST00000555518 LYPD4Q6UWN0 246 aa9.74□□□□□ -0.85
LINC00643-203ENST00000555518 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
LINC00643-203ENST00000555518 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
LINC00643-203ENST00000555518 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
LINC00643-203ENST00000555518 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
LINC00643-203ENST00000555518 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
LINC00643-203ENST00000555518 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
LINC00643-203ENST00000555518 UACAQ9BZF9 1416 aa9.73□□□□□ -0.85
LINC00643-203ENST00000555518 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 RFC5P40937 340 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 GAS6Q14393 721 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
LINC00643-203ENST00000555518 DYRK1BQ9Y463 629 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 UHRF1BP1LA0JNW5 1464 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 ARHGEF11O15085 1522 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 EHBP1L1Q8N3D4 1523 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 ABCC2Q92887 1545 aa9.72□□□□□ -0.85
LINC00643-203ENST00000555518 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
LINC00643-203ENST00000555518 BEND7Q8N7W2 519 aaPredicted RBP9.71□□□□□ -0.86
LINC00643-203ENST00000555518 ZNF837Q96EG3 531 aaPredicted RBP9.71□□□□□ -0.86
LINC00643-203ENST00000555518 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
LINC00643-203ENST00000555518 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.86
LINC00643-203ENST00000555518 TTBK1Q5TCY1 1321 aaPredicted RBP9.71□□□□□ -0.86
LINC00643-203ENST00000555518 ATP10BO94823 1461 aa9.71□□□□□ -0.86
LINC00643-203ENST00000555518 TRIM26Q12899 539 aaPredicted RBP9.7□□□□□ -0.86
LINC00643-203ENST00000555518 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
LINC00643-203ENST00000555518 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
LINC00643-203ENST00000555518 CUEDC1Q9NWM3 386 aaPredicted RBP9.7□□□□□ -0.86
LINC00643-203ENST00000555518 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
LINC00643-203ENST00000555518 PHLDB1Q86UU1 1377 aa9.69□□□□□ -0.86
LINC00643-203ENST00000555518 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 MEN1O00255 615 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 BCRP11274 1271 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 RHOQP17081 205 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 RIPOR1Q6ZS17 1223 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 ZNF330Q9Y3S2 320 aaPredicted RBP9.68□□□□□ -0.86
LINC00643-203ENST00000555518 PCDHB9Q9Y5E1 797 aa9.68□□□□□ -0.86
LINC00643-203ENST00000555518 KDM5BQ9UGL1 1544 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
LINC00643-203ENST00000555518 A0A1W2PRU2 124 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 CYP2U1Q7Z449 544 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
LINC00643-203ENST00000555518 TRIM34Q9BYJ4 488 aa9.67□□□□□ -0.86
LINC00643-203ENST00000555518 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
LINC00643-203ENST00000555518 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms