RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 DCAF5Q96JK2 942 aa27.39■■□□□ 1.98
KTN1-221ENST00000555498 KNSTRNQ9Y448 316 aa27.39■■□□□ 1.98
KTN1-221ENST00000555498 YBX3P16989 372 aaKnown RBP eCLIP27.38■■□□□ 1.97
KTN1-221ENST00000555498 AMIGO3Q86WK7 504 aa27.38■■□□□ 1.97
KTN1-221ENST00000555498 ITPK1Q13572 414 aa27.37■■□□□ 1.97
KTN1-221ENST00000555498 GNPATO15228 680 aa27.35■■□□□ 1.97
KTN1-221ENST00000555498 ZNF530Q6P9A1 599 aaPredicted RBP27.34■■□□□ 1.97
KTN1-221ENST00000555498 SMIM5Q71RC9 77 aa27.33■■□□□ 1.97
KTN1-221ENST00000555498 C1QTNF8P60827 252 aa27.32■■□□□ 1.96
KTN1-221ENST00000555498 ZNF831Q5JPB2 1677 aa27.32■■□□□ 1.96
KTN1-221ENST00000555498 C1orf141Q5JVX7 400 aa27.31■■□□□ 1.96
KTN1-221ENST00000555498 RBM42Q9BTD8 480 aaKnown RBP27.31■■□□□ 1.96
KTN1-221ENST00000555498 CABP4P57796 275 aa27.3■■□□□ 1.96
KTN1-221ENST00000555498 RTCBQ9Y3I0 505 aaKnown RBP27.3■■□□□ 1.96
KTN1-221ENST00000555498 KDRP35968 1356 aa27.3■■□□□ 1.96
KTN1-221ENST00000555498 MTHFSP49914 203 aa27.29■■□□□ 1.96
KTN1-221ENST00000555498 RC3H1Q5TC82 1133 aaKnown RBP27.29■■□□□ 1.96
KTN1-221ENST00000555498 TRAPPC3LQ5T215 181 aa27.28■■□□□ 1.96
KTN1-221ENST00000555498 SULT6B1Q6IMI4 303 aa27.28■■□□□ 1.96
KTN1-221ENST00000555498 AEBP1Q8IUX7 1158 aa27.28■■□□□ 1.96
KTN1-221ENST00000555498 GIGYF1O75420 1035 aaPredicted RBP27.27■■□□□ 1.96
KTN1-221ENST00000555498 GOLGB1Q14789 3259 aaKnown RBP27.26■■□□□ 1.96
KTN1-221ENST00000555498 KDM6AO15550 1401 aaPredicted RBP27.26■■□□□ 1.95
KTN1-221ENST00000555498 ADRA2BP18089 450 aa27.26■■□□□ 1.95
KTN1-221ENST00000555498 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
KTN1-221ENST00000555498 IL13P35225 146 aa27.25■■□□□ 1.95
KTN1-221ENST00000555498 AMER1Q5JTC6 1135 aaPredicted RBP27.25■■□□□ 1.95
KTN1-221ENST00000555498 NLGN1Q8N2Q7 840 aa27.25■■□□□ 1.95
KTN1-221ENST00000555498 CNTNAP4Q9C0A0 1308 aa27.24■■□□□ 1.95
KTN1-221ENST00000555498 MMP10P09238 476 aa27.23■■□□□ 1.95
KTN1-221ENST00000555498 KIF7Q2M1P5 1343 aa27.22■■□□□ 1.95
KTN1-221ENST00000555498 COL5A3P25940 1745 aaPredicted RBP27.22■■□□□ 1.95
KTN1-221ENST00000555498 RPS6KA4O75676 772 aa27.22■■□□□ 1.95
KTN1-221ENST00000555498 NFATC2IPQ8NCF5 419 aa27.22■■□□□ 1.95
KTN1-221ENST00000555498 ARHGEF1Q92888 912 aaKnown RBP27.21■■□□□ 1.95
KTN1-221ENST00000555498 SENP3-EIF4A1A0A087X0R7 540 aa27.2■■□□□ 1.94
KTN1-221ENST00000555498 RFC4P35249 363 aa27.2■■□□□ 1.94
KTN1-221ENST00000555498 PTCD1O75127 700 aaKnown RBP27.19■■□□□ 1.94
KTN1-221ENST00000555498 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
KTN1-221ENST00000555498 SCN11AQ9UI33 1791 aa27.17■■□□□ 1.94
KTN1-221ENST00000555498 TGFB2P61812 414 aa27.17■■□□□ 1.94
KTN1-221ENST00000555498 ATP10DQ9P241 1426 aa27.16■■□□□ 1.94
KTN1-221ENST00000555498 MYH14Q7Z406 1995 aaKnown RBP27.16■■□□□ 1.94
KTN1-221ENST00000555498 KIF13BQ9NQT8 1826 aa27.16■■□□□ 1.94
KTN1-221ENST00000555498 GYS1P13807 737 aa27.15■■□□□ 1.94
KTN1-221ENST00000555498 PER1O15534 1290 aaPredicted RBP27.14■■□□□ 1.94
KTN1-221ENST00000555498 WWC3Q9ULE0 1092 aa27.14■■□□□ 1.94
KTN1-221ENST00000555498 CRKLP46109 303 aaKnown RBP27.13■■□□□ 1.93
KTN1-221ENST00000555498 CCDC87Q9NVE4 849 aa27.13■■□□□ 1.93
KTN1-221ENST00000555498 PARP3Q9Y6F1 533 aa27.13■■□□□ 1.93
KTN1-221ENST00000555498 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
KTN1-221ENST00000555498 GPBP1L1Q9HC44 474 aaPredicted RBP27.12■■□□□ 1.93
KTN1-221ENST00000555498 ADCY9O60503 1353 aa27.11■■□□□ 1.93
KTN1-221ENST00000555498 SLC52A2Q9HAB3 445 aa27.11■■□□□ 1.93
KTN1-221ENST00000555498 DIAPH1O60610 1272 aaKnown RBP27.1■■□□□ 1.93
KTN1-221ENST00000555498 HMOX1P09601 288 aa27.1■■□□□ 1.93
KTN1-221ENST00000555498 PXDNLA1KZ92 1463 aa27.1■■□□□ 1.93
KTN1-221ENST00000555498 C4AP0C0L4 1744 aa27.1■■□□□ 1.93
KTN1-221ENST00000555498 C10orf71Q711Q0 1435 aa27.09■■□□□ 1.93
KTN1-221ENST00000555498 CC2D1BQ5T0F9 858 aaKnown RBP27.09■■□□□ 1.93
KTN1-221ENST00000555498 LGR6Q9HBX8 967 aa27.08■■□□□ 1.93
KTN1-221ENST00000555498 TJP1Q07157 1748 aa27.07■■□□□ 1.92
KTN1-221ENST00000555498 N4BP2Q86UW6 1770 aaPredicted RBP27.07■■□□□ 1.92
KTN1-221ENST00000555498 A0A0G2JLW4 131 aa27.07■■□□□ 1.92
KTN1-221ENST00000555498 RNMTO43148 476 aaKnown RBP27.07■■□□□ 1.92
KTN1-221ENST00000555498 KIAA1551Q9HCM1 1747 aa27.06■■□□□ 1.92
KTN1-221ENST00000555498 USP42Q9H9J4 1324 aaKnown RBP27.06■■□□□ 1.92
KTN1-221ENST00000555498 NPC1L1Q9UHC9 1359 aa27.06■■□□□ 1.92
KTN1-221ENST00000555498 VIRMAQ69YN4 1812 aaKnown RBP27.05■■□□□ 1.92
KTN1-221ENST00000555498 INTS5Q6P9B9 1019 aaKnown RBP27.05■■□□□ 1.92
KTN1-221ENST00000555498 BCS1LQ9Y276 419 aa27.05■■□□□ 1.92
KTN1-221ENST00000555498 MTHFSDQ2M296 383 aaKnown RBP27.04■■□□□ 1.92
KTN1-221ENST00000555498 MRC1P22897 1456 aa27.04■■□□□ 1.92
KTN1-221ENST00000555498 DNAJC10Q8IXB1 793 aa27.03■■□□□ 1.92
KTN1-221ENST00000555498 ZNF526Q8TF50 670 aaPredicted RBP27.03■■□□□ 1.92
KTN1-221ENST00000555498 SRP68Q9UHB9 627 aaKnown RBP27.03■■□□□ 1.92
KTN1-221ENST00000555498 DPEP1P16444 411 aa27.02■■□□□ 1.92
KTN1-221ENST00000555498 ZPR1O75312 459 aa27.01■■□□□ 1.91
KTN1-221ENST00000555498 FKBP8Q14318 412 aa27.01■■□□□ 1.91
KTN1-221ENST00000555498 SLC39A6Q13433 755 aa27■■□□□ 1.91
KTN1-221ENST00000555498 ADAMTS7Q9UKP4 1686 aa27■■□□□ 1.91
KTN1-221ENST00000555498 FCHSD2O94868 740 aa26.99■■□□□ 1.91
KTN1-221ENST00000555498 CYP19A1P11511 503 aaPredicted RBP26.99■■□□□ 1.91
KTN1-221ENST00000555498 VSIG10Q8N0Z9 540 aa26.99■■□□□ 1.91
KTN1-221ENST00000555498 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
KTN1-221ENST00000555498 ARHGAP27Q6ZUM4 889 aa26.98■■□□□ 1.91
KTN1-221ENST00000555498 PIM2Q9P1W9 311 aa26.98■■□□□ 1.91
KTN1-221ENST00000555498 SOS1Q07889 1333 aaPredicted RBP26.97■■□□□ 1.91
KTN1-221ENST00000555498 DDR1Q08345 913 aa26.97■■□□□ 1.91
KTN1-221ENST00000555498 U2SURPO15042 1029 aaKnown RBP26.96■■□□□ 1.91
KTN1-221ENST00000555498 KCNA3P22001 575 aa26.96■■□□□ 1.91
KTN1-221ENST00000555498 TM4SF1P30408 202 aa26.96■■□□□ 1.91
KTN1-221ENST00000555498 KCPQ6ZWJ8 1503 aa26.95■■□□□ 1.91
KTN1-221ENST00000555498 USPL1Q5W0Q7 1092 aa26.95■■□□□ 1.9
KTN1-221ENST00000555498 GAS2L2Q8NHY3 880 aa26.95■■□□□ 1.9
KTN1-221ENST00000555498 POLRMTO00411 1230 aaKnown RBP26.94■■□□□ 1.9
KTN1-221ENST00000555498 CNGB1Q14028 1251 aaPredicted RBP26.94■■□□□ 1.9
KTN1-221ENST00000555498 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
KTN1-221ENST00000555498 NARFQ9UHQ1 456 aa26.94■■□□□ 1.9
KTN1-221ENST00000555498 ARFGEF1Q9Y6D6 1849 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms