RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 PLPPR3Q6T4P5 718 aa12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 SMARCA5O60264 1052 aaPredicted RBP12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 PDE1AP54750 535 aa12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 LRRCC1Q9C099 1032 aa12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 APBB1O00213 710 aa12.22□□□□□ -0.45
RPGRIP1-208ENST00000555489 NUCB2P80303 420 aa12.22□□□□□ -0.45
RPGRIP1-208ENST00000555489 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
RPGRIP1-208ENST00000555489 XRCC6P12956 609 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPGRIP1-208ENST00000555489 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
RPGRIP1-208ENST00000555489 ATP8B2P98198 1209 aa12.21□□□□□ -0.45
RPGRIP1-208ENST00000555489 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
RPGRIP1-208ENST00000555489 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.46
RPGRIP1-208ENST00000555489 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.46
RPGRIP1-208ENST00000555489 CEMIPQ8WUJ3 1361 aa12.2□□□□□ -0.46
RPGRIP1-208ENST00000555489 HOXB7P09629 217 aa12.2□□□□□ -0.46
RPGRIP1-208ENST00000555489 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
RPGRIP1-208ENST00000555489 AOX1Q06278 1338 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 MX1P20591 662 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 IP6K1Q92551 441 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 MCM2P49736 904 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 HDGFL1Q5TGJ6 251 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 GRPEL1Q9HAV7 217 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
RPGRIP1-208ENST00000555489 NFAT5O94916 1531 aa12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 LTN1O94822 1766 aa12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 MCCP23508 829 aa12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
RPGRIP1-208ENST00000555489 SSFA2P28290 1259 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 ANAPC15P60006 121 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 RAB11FIP3O75154 756 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 KLHL40Q2TBA0 621 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
RPGRIP1-208ENST00000555489 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 LTV1Q96GA3 475 aaPredicted RBP12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 ESYT1Q9BSJ8 1104 aa12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
RPGRIP1-208ENST00000555489 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
RPGRIP1-208ENST00000555489 ARXQ96QS3 562 aa12.15□□□□□ -0.46
RPGRIP1-208ENST00000555489 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
RPGRIP1-208ENST00000555489 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
RPGRIP1-208ENST00000555489 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.47
RPGRIP1-208ENST00000555489 LMO7Q8WWI1 1683 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 IL17RAQ96F46 866 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 CHMLP26374 656 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 AMOTQ4VCS5 1084 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
RPGRIP1-208ENST00000555489 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 PSME1Q06323 249 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 POLA2Q14181 598 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 TEFQ10587 303 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 NBPF6Q5VWK0 638 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 NBPF4Q96M43 638 aa12.13□□□□□ -0.47
RPGRIP1-208ENST00000555489 NEK4P51957 841 aa12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 LMTK3Q96Q04 1460 aa12.12□□□□□ -0.47
RPGRIP1-208ENST00000555489 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 DNAAF4Q8WXU2 420 aa12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 MCTP1Q6DN14 999 aa12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
RPGRIP1-208ENST00000555489 SLIT3O75094 1523 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 SURF6O75683 361 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms