RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 TAF1LQ8IZX4 1826 aa26.3■■□□□ 1.8
CBLN3-202ENST00000555436 HMOX1P09601 288 aa26.29■■□□□ 1.8
CBLN3-202ENST00000555436 ATP6V1AP38606 617 aa26.29■■□□□ 1.8
CBLN3-202ENST00000555436 ITPK1Q13572 414 aa26.29■■□□□ 1.8
CBLN3-202ENST00000555436 COL24A1Q17RW2 1714 aa26.28■■□□□ 1.8
CBLN3-202ENST00000555436 AMIGO3Q86WK7 504 aa26.27■■□□□ 1.8
CBLN3-202ENST00000555436 COL3A1P02461 1466 aaPredicted RBP26.26■■□□□ 1.79
CBLN3-202ENST00000555436 AKAP4Q5JQC9 854 aa26.26■■□□□ 1.79
CBLN3-202ENST00000555436 SSFA2P28290 1259 aa26.25■■□□□ 1.79
CBLN3-202ENST00000555436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.24■■□□□ 1.79
CBLN3-202ENST00000555436 MSL1Q68DK7 614 aa26.24■■□□□ 1.79
CBLN3-202ENST00000555436 NFATC2IPQ8NCF5 419 aa26.24■■□□□ 1.79
CBLN3-202ENST00000555436 SLC4A9Q96Q91 983 aa26.24■■□□□ 1.79
CBLN3-202ENST00000555436 PHF14O94880 888 aa26.23■■□□□ 1.79
CBLN3-202ENST00000555436 RBM42Q9BTD8 480 aaKnown RBP26.23■■□□□ 1.79
CBLN3-202ENST00000555436 GNPATO15228 680 aa26.21■■□□□ 1.79
CBLN3-202ENST00000555436 SMIM5Q71RC9 77 aa26.21■■□□□ 1.79
CBLN3-202ENST00000555436 KLHL34Q8N239 644 aa26.21■■□□□ 1.79
CBLN3-202ENST00000555436 U2SURPO15042 1029 aaKnown RBP26.2■■□□□ 1.78
CBLN3-202ENST00000555436 MTHFSDQ2M296 383 aaKnown RBP26.2■■□□□ 1.78
CBLN3-202ENST00000555436 UBR3Q6ZT12 1888 aa26.19■■□□□ 1.78
CBLN3-202ENST00000555436 YY1P25490 414 aa26.18■■□□□ 1.78
CBLN3-202ENST00000555436 CFAP53Q96M91 514 aa26.18■■□□□ 1.78
CBLN3-202ENST00000555436 SLC52A2Q9HAB3 445 aa26.18■■□□□ 1.78
CBLN3-202ENST00000555436 LGR6Q9HBX8 967 aa26.18■■□□□ 1.78
CBLN3-202ENST00000555436 ZNF831Q5JPB2 1677 aa26.18■■□□□ 1.78
CBLN3-202ENST00000555436 RNMTO43148 476 aaKnown RBP26.17■■□□□ 1.78
CBLN3-202ENST00000555436 PTCD1O75127 700 aaKnown RBP26.17■■□□□ 1.78
CBLN3-202ENST00000555436 RC3H1Q5TC82 1133 aaKnown RBP26.17■■□□□ 1.78
CBLN3-202ENST00000555436 CNTNAP4Q9C0A0 1308 aa26.15■■□□□ 1.78
CBLN3-202ENST00000555436 PPP2R1AP30153 589 aa26.15■■□□□ 1.78
CBLN3-202ENST00000555436 RTCBQ9Y3I0 505 aaKnown RBP26.15■■□□□ 1.78
CBLN3-202ENST00000555436 NLGN2Q8NFZ4 835 aa26.14■■□□□ 1.78
CBLN3-202ENST00000555436 MRC1P22897 1456 aa26.14■■□□□ 1.78
CBLN3-202ENST00000555436 SCN11AQ9UI33 1791 aa26.14■■□□□ 1.78
CBLN3-202ENST00000555436 TRAPPC3LQ5T215 181 aa26.12■■□□□ 1.77
CBLN3-202ENST00000555436 UTRNP46939 3433 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 ADRA2BP18089 450 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 GPR162Q16538 588 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 GAS2L2Q8NHY3 880 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 NUDCQ9Y266 331 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 CD2APQ9Y5K6 639 aa26.11■■□□□ 1.77
CBLN3-202ENST00000555436 RPS6KA4O75676 772 aa26.1■■□□□ 1.77
CBLN3-202ENST00000555436 ADAMTS7Q9UKP4 1686 aa26.09■■□□□ 1.77
CBLN3-202ENST00000555436 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.77
CBLN3-202ENST00000555436 CRKLP46109 303 aaKnown RBP26.08■■□□□ 1.77
CBLN3-202ENST00000555436 ARHGEF1Q92888 912 aaKnown RBP26.08■■□□□ 1.77
CBLN3-202ENST00000555436 RSPH6AQ9H0K4 717 aa26.08■■□□□ 1.77
CBLN3-202ENST00000555436 PRKAR2BP31323 418 aa26.07■■□□□ 1.76
CBLN3-202ENST00000555436 GNAT3A8MTJ3 354 aa26.06■■□□□ 1.76
CBLN3-202ENST00000555436 SLC39A6Q13433 755 aa26.06■■□□□ 1.76
CBLN3-202ENST00000555436 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
CBLN3-202ENST00000555436 PHACTR3Q96KR7 559 aa26.05■■□□□ 1.76
CBLN3-202ENST00000555436 CICQ96RK0 1608 aaPredicted RBP26.05■■□□□ 1.76
CBLN3-202ENST00000555436 U2AF1L5P0DN76 240 aaPredicted RBP26.04■■□□□ 1.76
CBLN3-202ENST00000555436 RFC4P35249 363 aa26.04■■□□□ 1.76
CBLN3-202ENST00000555436 U2AF1Q01081 240 aaKnown RBP eCLIP26.04■■□□□ 1.76
CBLN3-202ENST00000555436 NLGN1Q8N2Q7 840 aa26.04■■□□□ 1.76
CBLN3-202ENST00000555436 IL17REQ8NFR9 667 aa26.04■■□□□ 1.76
CBLN3-202ENST00000555436 MMP10P09238 476 aa26.03■■□□□ 1.76
CBLN3-202ENST00000555436 DNAJC10Q8IXB1 793 aa26.03■■□□□ 1.76
CBLN3-202ENST00000555436 FCHSD2O94868 740 aa26.02■■□□□ 1.76
CBLN3-202ENST00000555436 INTS5Q6P9B9 1019 aaKnown RBP26.02■■□□□ 1.76
CBLN3-202ENST00000555436 KCPQ6ZWJ8 1503 aa26.02■■□□□ 1.76
CBLN3-202ENST00000555436 TJP1Q07157 1748 aa26.02■■□□□ 1.76
CBLN3-202ENST00000555436 GYS1P13807 737 aa26.01■■□□□ 1.75
CBLN3-202ENST00000555436 TEFQ10587 303 aa26.01■■□□□ 1.75
CBLN3-202ENST00000555436 MYH14Q7Z406 1995 aaKnown RBP26.01■■□□□ 1.75
CBLN3-202ENST00000555436 VSIG10Q8N0Z9 540 aa26.01■■□□□ 1.75
CBLN3-202ENST00000555436 YBX3P16989 372 aaKnown RBP eCLIP26■■□□□ 1.75
CBLN3-202ENST00000555436 CCDC87Q9NVE4 849 aa26■■□□□ 1.75
CBLN3-202ENST00000555436 CEMIPQ8WUJ3 1361 aa25.99■■□□□ 1.75
CBLN3-202ENST00000555436 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
CBLN3-202ENST00000555436 CYP19A1P11511 503 aaPredicted RBP25.99■■□□□ 1.75
CBLN3-202ENST00000555436 GRIN3BO60391 1043 aa25.98■■□□□ 1.75
CBLN3-202ENST00000555436 TTC5Q8N0Z6 440 aa25.98■■□□□ 1.75
CBLN3-202ENST00000555436 USP42Q9H9J4 1324 aaKnown RBP25.96■■□□□ 1.75
CBLN3-202ENST00000555436 ZNF790Q6PG37 636 aa25.96■■□□□ 1.75
CBLN3-202ENST00000555436 SOS1Q07889 1333 aaPredicted RBP25.95■■□□□ 1.75
CBLN3-202ENST00000555436 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
CBLN3-202ENST00000555436 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.74
CBLN3-202ENST00000555436 ZNF496Q96IT1 587 aaPredicted RBP25.94■■□□□ 1.74
CBLN3-202ENST00000555436 C4AP0C0L4 1744 aa25.93■■□□□ 1.74
CBLN3-202ENST00000555436 ZNF784Q8NCA9 323 aaPredicted RBP25.92■■□□□ 1.74
CBLN3-202ENST00000555436 ZBTB1Q9Y2K1 713 aa25.92■■□□□ 1.74
CBLN3-202ENST00000555436 PARP3Q9Y6F1 533 aa25.92■■□□□ 1.74
CBLN3-202ENST00000555436 UBR2Q8IWV8 1755 aa25.92■■□□□ 1.74
CBLN3-202ENST00000555436 STARD3NLO95772 234 aa25.91■■□□□ 1.74
CBLN3-202ENST00000555436 FKBP8Q14318 412 aa25.91■■□□□ 1.74
CBLN3-202ENST00000555436 RTF1Q92541 710 aaKnown RBP25.91■■□□□ 1.74
CBLN3-202ENST00000555436 HEG1Q9ULI3 1381 aa25.9■■□□□ 1.74
CBLN3-202ENST00000555436 CHD4Q14839 1912 aa25.9■■□□□ 1.74
CBLN3-202ENST00000555436 C10orf71Q711Q0 1435 aa25.89■■□□□ 1.74
CBLN3-202ENST00000555436 BTBD11A6QL63 1104 aa25.89■■□□□ 1.74
CBLN3-202ENST00000555436 HTATSF1O43719 755 aaKnown RBP25.89■■□□□ 1.74
CBLN3-202ENST00000555436 ZPR1O75312 459 aa25.89■■□□□ 1.74
CBLN3-202ENST00000555436 DDX10Q13206 875 aaKnown RBP25.89■■□□□ 1.74
CBLN3-202ENST00000555436 RALBP1Q15311 655 aa25.89■■□□□ 1.74
CBLN3-202ENST00000555436 TEX13AQ9BXU3 409 aaPredicted RBP25.89■■□□□ 1.74
CBLN3-202ENST00000555436 SIPA1L3O60292 1781 aaPredicted RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms