RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.34
PRKCH-215ENST00000555382 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
PRKCH-215ENST00000555382 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
PRKCH-215ENST00000555382 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
PRKCH-215ENST00000555382 USHBP1Q8N6Y0 703 aa12.95□□□□□ -0.34
PRKCH-215ENST00000555382 FLT4P35916 1363 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 TOMM70O94826 608 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 SSFA2P28290 1259 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 ARFGEF1Q9Y6D6 1849 aa12.94□□□□□ -0.34
PRKCH-215ENST00000555382 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
PRKCH-215ENST00000555382 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-215ENST00000555382 AMPHP49418 695 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 MTHFSP49914 203 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
PRKCH-215ENST00000555382 NKX1-1Q15270 411 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-215ENST00000555382 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
PRKCH-215ENST00000555382 PIGBQ92521 554 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 AK7Q96M32 723 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 NMRK2Q9NPI5 230 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 KDRP35968 1356 aa12.92□□□□□ -0.34
PRKCH-215ENST00000555382 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
PRKCH-215ENST00000555382 ITPK1Q13572 414 aa12.91□□□□□ -0.34
PRKCH-215ENST00000555382 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
PRKCH-215ENST00000555382 CCER2I3L3R5 266 aa12.9□□□□□ -0.34
PRKCH-215ENST00000555382 PHF14O94880 888 aa12.9□□□□□ -0.34
PRKCH-215ENST00000555382 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
PRKCH-215ENST00000555382 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
PRKCH-215ENST00000555382 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
PRKCH-215ENST00000555382 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
PRKCH-215ENST00000555382 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
PRKCH-215ENST00000555382 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
PRKCH-215ENST00000555382 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
PRKCH-215ENST00000555382 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
PRKCH-215ENST00000555382 SIK1P57059 783 aa12.89□□□□□ -0.35
PRKCH-215ENST00000555382 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
PRKCH-215ENST00000555382 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
PRKCH-215ENST00000555382 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
PRKCH-215ENST00000555382 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
PRKCH-215ENST00000555382 MMP10P09238 476 aa12.88□□□□□ -0.35
PRKCH-215ENST00000555382 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
PRKCH-215ENST00000555382 HTRA3P83110 453 aa12.88□□□□□ -0.35
PRKCH-215ENST00000555382 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
PRKCH-215ENST00000555382 KCNA3P22001 575 aa12.87□□□□□ -0.35
PRKCH-215ENST00000555382 TGFB2P61812 414 aa12.87□□□□□ -0.35
PRKCH-215ENST00000555382 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
PRKCH-215ENST00000555382 SBF1O95248 1867 aa12.87□□□□□ -0.35
PRKCH-215ENST00000555382 ADAMTS7Q9UKP4 1686 aa12.86□□□□□ -0.35
PRKCH-215ENST00000555382 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
PRKCH-215ENST00000555382 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
PRKCH-215ENST00000555382 A0A0G2JLW4 131 aa12.85□□□□□ -0.35
PRKCH-215ENST00000555382 GNPATO15228 680 aa12.85□□□□□ -0.35
PRKCH-215ENST00000555382 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
PRKCH-215ENST00000555382 IL13P35225 146 aa12.85□□□□□ -0.35
PRKCH-215ENST00000555382 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
PRKCH-215ENST00000555382 FSTL1Q12841 308 aa12.84□□□□□ -0.35
PRKCH-215ENST00000555382 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
PRKCH-215ENST00000555382 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-215ENST00000555382 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
PRKCH-215ENST00000555382 DPEP1P16444 411 aa12.83□□□□□ -0.36
PRKCH-215ENST00000555382 PRELPP51888 382 aa12.83□□□□□ -0.36
PRKCH-215ENST00000555382 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
PRKCH-215ENST00000555382 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
PRKCH-215ENST00000555382 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
PRKCH-215ENST00000555382 GYS1P13807 737 aa12.82□□□□□ -0.36
PRKCH-215ENST00000555382 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
PRKCH-215ENST00000555382 MIER1Q8N108 512 aa12.82□□□□□ -0.36
PRKCH-215ENST00000555382 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
PRKCH-215ENST00000555382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRKCH-215ENST00000555382 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
PRKCH-215ENST00000555382 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
PRKCH-215ENST00000555382 TJP1Q07157 1748 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 FCHSD2O94868 740 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 PHKG2P15735 406 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
PRKCH-215ENST00000555382 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
PRKCH-215ENST00000555382 EYA1Q99502 592 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
PRKCH-215ENST00000555382 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
PRKCH-215ENST00000555382 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
PRKCH-215ENST00000555382 ADRA2BP18089 450 aa12.79□□□□□ -0.36
PRKCH-215ENST00000555382 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
PRKCH-215ENST00000555382 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
PRKCH-215ENST00000555382 MRS2Q9HD23 443 aa12.79□□□□□ -0.36
PRKCH-215ENST00000555382 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
PRKCH-215ENST00000555382 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
PRKCH-215ENST00000555382 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
PRKCH-215ENST00000555382 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
PRKCH-215ENST00000555382 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
PRKCH-215ENST00000555382 CAPN15O75808 1086 aa12.77□□□□□ -0.37
PRKCH-215ENST00000555382 DDR1Q08345 913 aa12.77□□□□□ -0.37
PRKCH-215ENST00000555382 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
PRKCH-215ENST00000555382 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
PRKCH-215ENST00000555382 CCDC184Q52MB2 194 aa12.76□□□□□ -0.37
PRKCH-215ENST00000555382 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms