RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 PRAG1Q86YV5 1406 aa9.23□□□□□ -0.93
TGFB3-202ENST00000554980 TSR1Q2NL82 804 aaKnown RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 FAM117AQ9C073 453 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 MYOM2P54296 1465 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 ABCC11Q96J66 1382 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 TCF3P15923 654 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 ANP32AP39687 249 aaKnown RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 XPCQ01831 940 aaPredicted RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
TGFB3-202ENST00000554980 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
TGFB3-202ENST00000554980 TECPR2O15040 1411 aa9.21□□□□□ -0.93
TGFB3-202ENST00000554980 STK10O94804 968 aaKnown RBP9.21□□□□□ -0.93
TGFB3-202ENST00000554980 GYS2P54840 703 aa9.21□□□□□ -0.93
TGFB3-202ENST00000554980 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.93
TGFB3-202ENST00000554980 PDCL3Q9H2J4 239 aa9.21□□□□□ -0.93
TGFB3-202ENST00000554980 TRAK1Q9UPV9 953 aa9.21□□□□□ -0.93
TGFB3-202ENST00000554980 UBXN4Q92575 508 aa9.21□□□□□ -0.94
TGFB3-202ENST00000554980 PRAM1Q96QH2 718 aa9.21□□□□□ -0.94
TGFB3-202ENST00000554980 COMMD10Q9Y6G5 202 aa9.21□□□□□ -0.94
TGFB3-202ENST00000554980 ADGRB1O14514 1584 aa9.21□□□□□ -0.94
TGFB3-202ENST00000554980 JCADQ9P266 1359 aa9.21□□□□□ -0.94
TGFB3-202ENST00000554980 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
TGFB3-202ENST00000554980 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
TGFB3-202ENST00000554980 C4orf46Q504U0 113 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
TGFB3-202ENST00000554980 IRF2BPLQ9H1B7 796 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 ESCO1Q5FWF5 840 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.2□□□□□ -0.94
TGFB3-202ENST00000554980 AMOTL1Q8IY63 956 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 JADE2Q9NQC1 790 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 GABBR1Q9UBS5 961 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
TGFB3-202ENST00000554980 FOXO3O43524 673 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 PPP4CP60510 307 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 C11orf96Q7Z7L8 435 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 NRBP1Q9UHY1 535 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 TPX2Q9ULW0 747 aaKnown RBP9.19□□□□□ -0.94
TGFB3-202ENST00000554980 CFAP69A5D8W1 941 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 SOCS7O14512 581 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
TGFB3-202ENST00000554980 ZCRB1Q8TBF4 217 aaKnown RBP9.19□□□□□ -0.94
TGFB3-202ENST00000554980 RGPD8O14715 1765 aaPredicted RBP9.19□□□□□ -0.94
TGFB3-202ENST00000554980 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
TGFB3-202ENST00000554980 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
TGFB3-202ENST00000554980 UTP14CQ5TAP6 766 aaKnown RBP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 SMAP1Q8IYB5 467 aaPredicted RBP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
TGFB3-202ENST00000554980 COPB2P35606 906 aa9.18□□□□□ -0.94
TGFB3-202ENST00000554980 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
TGFB3-202ENST00000554980 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
TGFB3-202ENST00000554980 CDC42BPGQ6DT37 1551 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 WDHD1O75717 1129 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-202ENST00000554980 SATB1Q01826 763 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 ZRSR2Q15696 482 aaKnown RBP9.17□□□□□ -0.94
TGFB3-202ENST00000554980 EP400Q96L91 3159 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-202ENST00000554980 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-202ENST00000554980 CT47B1P0C2W7 299 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-202ENST00000554980 PRR29P0C7W0 189 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 PSME1Q06323 249 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 MRVI1Q9Y6F6 885 aa9.17□□□□□ -0.94
TGFB3-202ENST00000554980 SHPRHQ149N8 1683 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 TDO2P48775 406 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
TGFB3-202ENST00000554980 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 UVSSAQ2YD98 709 aa9.16□□□□□ -0.94
TGFB3-202ENST00000554980 SNRNP27Q8WVK2 155 aaKnown RBP9.16□□□□□ -0.94
TGFB3-202ENST00000554980 FBXO9Q9UK97 447 aaPredicted RBP9.16□□□□□ -0.94
TGFB3-202ENST00000554980 LAMC1P11047 1609 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 POGKQ9P215 609 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 FMN2Q9NZ56 1722 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 SPATA31A6Q5VVP1 1343 aa9.15□□□□□ -0.94
TGFB3-202ENST00000554980 ADAMTS2O95450 1211 aa9.15□□□□□ -0.95
TGFB3-202ENST00000554980 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.95
TGFB3-202ENST00000554980 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.95
TGFB3-202ENST00000554980 CTDP1Q9Y5B0 961 aaPredicted RBP9.15□□□□□ -0.95
TGFB3-202ENST00000554980 PXDNQ92626 1479 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 PRR36Q9H6K5 1346 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 FAM200BP0CF97 657 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 DNTTIP2Q5QJE6 756 aaKnown RBP9.14□□□□□ -0.95
TGFB3-202ENST00000554980 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
TGFB3-202ENST00000554980 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 USP32Q8NFA0 1604 aa9.14□□□□□ -0.95
TGFB3-202ENST00000554980 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
TGFB3-202ENST00000554980 MEX3CQ5U5Q3 659 aaKnown RBP9.14□□□□□ -0.95
TGFB3-202ENST00000554980 PROM2Q8N271 834 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms