RNA–Protein interactions for RNA: ENST00000554938.1

LIN52-204, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 4

Gene LIN52, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-204ENST00000554938 PRDM11Q9NQV5 511 aa12.17□□□□□ -0.46
LIN52-204ENST00000554938 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
LIN52-204ENST00000554938 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
LIN52-204ENST00000554938 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
LIN52-204ENST00000554938 SCN11AQ9UI33 1791 aa12.15□□□□□ -0.46
LIN52-204ENST00000554938 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
LIN52-204ENST00000554938 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
LIN52-204ENST00000554938 CCT4P50991 539 aaKnown RBP12.14□□□□□ -0.47
LIN52-204ENST00000554938 EVA1CP58658 441 aa12.14□□□□□ -0.47
LIN52-204ENST00000554938 SKAP1Q86WV1 359 aa12.14□□□□□ -0.47
LIN52-204ENST00000554938 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
LIN52-204ENST00000554938 ABCA3Q99758 1704 aa12.14□□□□□ -0.47
LIN52-204ENST00000554938 PHKG2P15735 406 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 G2E3Q7L622 706 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 SMC5Q8IY18 1101 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
LIN52-204ENST00000554938 WDR17Q8IZU2 1322 aa12.12□□□□□ -0.47
LIN52-204ENST00000554938 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
LIN52-204ENST00000554938 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
LIN52-204ENST00000554938 FLIIQ13045 1269 aa12.12□□□□□ -0.47
LIN52-204ENST00000554938 RPAP2Q8IXW5 612 aaPredicted RBP12.12□□□□□ -0.47
LIN52-204ENST00000554938 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
LIN52-204ENST00000554938 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
LIN52-204ENST00000554938 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
LIN52-204ENST00000554938 FKBP5Q13451 457 aaPredicted RBP12.11□□□□□ -0.47
LIN52-204ENST00000554938 SLC4A10Q6U841 1118 aa12.11□□□□□ -0.47
LIN52-204ENST00000554938 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
LIN52-204ENST00000554938 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
LIN52-204ENST00000554938 RGS12O14924 1447 aa12.11□□□□□ -0.47
LIN52-204ENST00000554938 KCNQ3O43525 872 aa12.1□□□□□ -0.47
LIN52-204ENST00000554938 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
LIN52-204ENST00000554938 MEGF6O75095 1541 aa12.1□□□□□ -0.47
LIN52-204ENST00000554938 GNAI3P08754 354 aa12.09□□□□□ -0.47
LIN52-204ENST00000554938 NUCB1Q02818 461 aa12.09□□□□□ -0.47
LIN52-204ENST00000554938 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
LIN52-204ENST00000554938 ZCRB1Q8TBF4 217 aaKnown RBP12.09□□□□□ -0.47
LIN52-204ENST00000554938 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
LIN52-204ENST00000554938 ROBO1Q9Y6N7 1651 aa12.09□□□□□ -0.47
LIN52-204ENST00000554938 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
LIN52-204ENST00000554938 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
LIN52-204ENST00000554938 F6X3S4 739 aa12.08□□□□□ -0.48
LIN52-204ENST00000554938 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
LIN52-204ENST00000554938 IL2RBP14784 551 aa12.08□□□□□ -0.48
LIN52-204ENST00000554938 STRN4Q9NRL3 753 aa12.08□□□□□ -0.48
LIN52-204ENST00000554938 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
LIN52-204ENST00000554938 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
LIN52-204ENST00000554938 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
LIN52-204ENST00000554938 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
LIN52-204ENST00000554938 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 CYP27B1O15528 508 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 HMMRO75330 724 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 CABP4P57796 275 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 C8orf34Q49A92 452 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 PCDH11XQ9BZA7 1347 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 PCDH11YQ9BZA8 1340 aa12.07□□□□□ -0.48
LIN52-204ENST00000554938 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
LIN52-204ENST00000554938 COL14A1Q05707 1796 aaKnown RBP12.06□□□□□ -0.48
LIN52-204ENST00000554938 GNAI2P04899 355 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 MEIS3Q99687 375 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
LIN52-204ENST00000554938 HYPKQ9NX55 129 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
LIN52-204ENST00000554938 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
LIN52-204ENST00000554938 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
LIN52-204ENST00000554938 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
LIN52-204ENST00000554938 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
LIN52-204ENST00000554938 PHLPP1O60346 1717 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 TOM1O60784 492 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 DDX58O95786 925 aaKnown RBP12.04□□□□□ -0.48
LIN52-204ENST00000554938 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
LIN52-204ENST00000554938 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
LIN52-204ENST00000554938 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 SRCIN1Q9C0H9 1055 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 HDAC5Q9UQL6 1122 aa12.04□□□□□ -0.48
LIN52-204ENST00000554938 MRC1P22897 1456 aa12.03□□□□□ -0.48
LIN52-204ENST00000554938 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
LIN52-204ENST00000554938 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
LIN52-204ENST00000554938 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
LIN52-204ENST00000554938 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
LIN52-204ENST00000554938 LNPKQ9C0E8 428 aa12.03□□□□□ -0.48
LIN52-204ENST00000554938 DDX21Q9NR30 783 aaKnown RBP eCLIP12.03□□□□□ -0.48
LIN52-204ENST00000554938 KSR2Q6VAB6 950 aa12.02□□□□□ -0.49
LIN52-204ENST00000554938 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
LIN52-204ENST00000554938 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
LIN52-204ENST00000554938 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
LIN52-204ENST00000554938 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms