RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 RIPK4P57078 832 aa10.58□□□□□ -0.72
LINC01397-201ENST00000554808 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
LINC01397-201ENST00000554808 APAF1O14727 1248 aa10.57□□□□□ -0.72
LINC01397-201ENST00000554808 TEFQ10587 303 aa10.57□□□□□ -0.72
LINC01397-201ENST00000554808 RNMTO43148 476 aaKnown RBP10.56□□□□□ -0.72
LINC01397-201ENST00000554808 BAG6P46379 1132 aa10.56□□□□□ -0.72
LINC01397-201ENST00000554808 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
LINC01397-201ENST00000554808 BABAM1Q9NWV8 329 aa10.56□□□□□ -0.72
LINC01397-201ENST00000554808 TMOD3Q9NYL9 352 aa10.56□□□□□ -0.72
LINC01397-201ENST00000554808 TJP1Q07157 1748 aa10.55□□□□□ -0.72
LINC01397-201ENST00000554808 CABP4P57796 275 aa10.55□□□□□ -0.72
LINC01397-201ENST00000554808 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
LINC01397-201ENST00000554808 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
LINC01397-201ENST00000554808 SLC52A2Q9HAB3 445 aa10.55□□□□□ -0.72
LINC01397-201ENST00000554808 EN1Q05925 392 aaPredicted RBP10.54□□□□□ -0.72
LINC01397-201ENST00000554808 SMARCC1Q92922 1105 aaPredicted RBP10.54□□□□□ -0.72
LINC01397-201ENST00000554808 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
LINC01397-201ENST00000554808 UBR3Q6ZT12 1888 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 CASZ1Q86V15 1759 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 WDR63Q8IWG1 891 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 TUBGCP6Q96RT7 1819 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 IL16Q14005 1332 aa10.53□□□□□ -0.72
LINC01397-201ENST00000554808 PLSCR1O15162 318 aa10.52□□□□□ -0.73
LINC01397-201ENST00000554808 TRIM37O94972 964 aa10.52□□□□□ -0.73
LINC01397-201ENST00000554808 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
LINC01397-201ENST00000554808 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
LINC01397-201ENST00000554808 ACSBG1Q96GR2 724 aa10.52□□□□□ -0.73
LINC01397-201ENST00000554808 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
LINC01397-201ENST00000554808 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
LINC01397-201ENST00000554808 MYH14Q7Z406 1995 aaKnown RBP10.52□□□□□ -0.73
LINC01397-201ENST00000554808 C4BP0C0L5 1744 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 GNAI1P63096 354 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 R3HDM1Q15032 1099 aaKnown RBP10.51□□□□□ -0.73
LINC01397-201ENST00000554808 MCM10Q7L590 875 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 WWC1Q8IX03 1113 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 TTC5Q8N0Z6 440 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 RRP7AQ9Y3A4 280 aaKnown RBP10.51□□□□□ -0.73
LINC01397-201ENST00000554808 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
LINC01397-201ENST00000554808 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
LINC01397-201ENST00000554808 PIGBQ92521 554 aa10.5□□□□□ -0.73
LINC01397-201ENST00000554808 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
LINC01397-201ENST00000554808 PALLDQ8WX93 1383 aa10.5□□□□□ -0.73
LINC01397-201ENST00000554808 UTRNP46939 3433 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 KCNQ2O43526 872 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01397-201ENST00000554808 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 EZH2Q15910 746 aaKnown RBP10.49□□□□□ -0.73
LINC01397-201ENST00000554808 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
LINC01397-201ENST00000554808 ZBED9Q6R2W3 1325 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 ZNF521Q96K83 1311 aa10.49□□□□□ -0.73
LINC01397-201ENST00000554808 C4AP0C0L4 1744 aa10.48□□□□□ -0.73
LINC01397-201ENST00000554808 APBA3O96018 575 aa10.48□□□□□ -0.73
LINC01397-201ENST00000554808 MYH16Q9H6N6 1097 aa10.48□□□□□ -0.73
LINC01397-201ENST00000554808 TSPYL4Q9UJ04 414 aa10.48□□□□□ -0.73
LINC01397-201ENST00000554808 CHL1O00533 1208 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 FMNL2Q96PY5 1086 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 CAMKK2Q96RR4 588 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 TEX13AQ9BXU3 409 aaPredicted RBP10.47□□□□□ -0.73
LINC01397-201ENST00000554808 HEG1Q9ULI3 1381 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 BCORQ6W2J9 1755 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 NUP98P52948 1817 aa10.47□□□□□ -0.73
LINC01397-201ENST00000554808 E9PSI1 815 aa10.46□□□□□ -0.73
LINC01397-201ENST00000554808 HOXB7P09629 217 aa10.46□□□□□ -0.73
LINC01397-201ENST00000554808 ZNF853P0CG23 659 aa10.46□□□□□ -0.73
LINC01397-201ENST00000554808 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.73
LINC01397-201ENST00000554808 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
LINC01397-201ENST00000554808 ASAP1Q9ULH1 1129 aa10.46□□□□□ -0.73
LINC01397-201ENST00000554808 ANKRD36CQ5JPF3 1778 aa10.46□□□□□ -0.74
LINC01397-201ENST00000554808 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
LINC01397-201ENST00000554808 SIK1P57059 783 aa10.45□□□□□ -0.74
LINC01397-201ENST00000554808 SALL2Q9Y467 1007 aaPredicted RBP10.45□□□□□ -0.74
LINC01397-201ENST00000554808 N4BP2Q86UW6 1770 aaPredicted RBP10.44□□□□□ -0.74
LINC01397-201ENST00000554808 SNRPA1P09661 255 aaKnown RBP10.44□□□□□ -0.74
LINC01397-201ENST00000554808 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
LINC01397-201ENST00000554808 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
LINC01397-201ENST00000554808 MBIPQ9NS73 344 aa10.44□□□□□ -0.74
LINC01397-201ENST00000554808 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
LINC01397-201ENST00000554808 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
LINC01397-201ENST00000554808 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
LINC01397-201ENST00000554808 CHD4Q14839 1912 aa10.43□□□□□ -0.74
LINC01397-201ENST00000554808 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
LINC01397-201ENST00000554808 AFDNP55196 1824 aaKnown RBP10.43□□□□□ -0.74
LINC01397-201ENST00000554808 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
LINC01397-201ENST00000554808 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
LINC01397-201ENST00000554808 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
LINC01397-201ENST00000554808 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
LINC01397-201ENST00000554808 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
LINC01397-201ENST00000554808 ARFGEF2Q9Y6D5 1785 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 CNTNAP4Q9C0A0 1308 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 FANCIQ9NVI1 1328 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 PTCD1O75127 700 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms