RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CCDC85AQ96PX6 553 aaPredicted RBP7.01□□□□□ -1.29
VTI1B-203ENST00000554636 PTPRGP23470 1445 aa7.01□□□□□ -1.29
VTI1B-203ENST00000554636 CARMIL2Q6F5E8 1435 aa7.01□□□□□ -1.29
VTI1B-203ENST00000554636 PTSQ03393 145 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 TSGA10IPQ3SY00 556 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 OXLD1Q5BKU9 147 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
VTI1B-203ENST00000554636 RNF135Q8IUD6 432 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 RAB6BQ9NRW1 208 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 DOLKQ9UPQ8 538 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 ERBB4Q15303 1308 aa7□□□□□ -1.29
VTI1B-203ENST00000554636 DIP2BQ9P265 1576 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 UHRF1BP1LA0JNW5 1464 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 ABCC10Q5T3U5 1492 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 H3BM21 787 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 RAD21O60216 631 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 SEMA3FQ13275 785 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 WASHC4Q2M389 1173 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 RNF217Q8TC41 542 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 ARHGEF10LQ9HCE6 1279 aa6.99□□□□□ -1.29
VTI1B-203ENST00000554636 ABCC2Q92887 1545 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 A0A1W2PRU2 124 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 MYCP01106 439 aaPredicted RBP6.98□□□□□ -1.29
VTI1B-203ENST00000554636 GMPRP36959 345 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 FLIIQ13045 1269 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 PRICKLE2Q7Z3G6 844 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 CYP2U1Q7Z449 544 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 TRIM52Q96A61 297 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 EEA1Q15075 1411 aa6.98□□□□□ -1.29
VTI1B-203ENST00000554636 RHOQP17081 205 aa6.97□□□□□ -1.29
VTI1B-203ENST00000554636 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
VTI1B-203ENST00000554636 IRF7Q92985 503 aa6.97□□□□□ -1.29
VTI1B-203ENST00000554636 NLRP3Q96P20 1036 aa6.97□□□□□ -1.29
VTI1B-203ENST00000554636 UACAQ9BZF9 1416 aa6.97□□□□□ -1.29
VTI1B-203ENST00000554636 POM121CA8CG34 1229 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 STAU1O95793 577 aaKnown RBP6.96□□□□□ -1.3
VTI1B-203ENST00000554636 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 CLUAP1Q96AJ1 413 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 GOLGA3Q08378 1498 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 KDM5BQ9UGL1 1544 aa6.96□□□□□ -1.3
VTI1B-203ENST00000554636 ABCA8O94911 1581 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 KIF21BO75037 1637 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 PIK3CDO00329 1044 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 SLC27A3Q5K4L6 730 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 LYSMD3Q7Z3D4 306 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 PHTF2Q8N3S3 785 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 CCDC155Q8N6L0 562 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 TTBK1Q5TCY1 1321 aaPredicted RBP6.95□□□□□ -1.3
VTI1B-203ENST00000554636 SAMD9Q5K651 1589 aa6.95□□□□□ -1.3
VTI1B-203ENST00000554636 ZCCHC11Q5TAX3 1644 aaKnown RBP6.94□□□□□ -1.3
VTI1B-203ENST00000554636 PLB1Q6P1J6 1458 aa6.94□□□□□ -1.3
VTI1B-203ENST00000554636 CDC14CA4D256 554 aa6.94□□□□□ -1.3
VTI1B-203ENST00000554636 TRAK2O60296 914 aa6.94□□□□□ -1.3
VTI1B-203ENST00000554636 PLPP7Q8NBV4 271 aa6.94□□□□□ -1.3
VTI1B-203ENST00000554636 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
VTI1B-203ENST00000554636 SOX11P35716 441 aa6.93□□□□□ -1.3
VTI1B-203ENST00000554636 FAM69CQ0P6D2 419 aa6.93□□□□□ -1.3
VTI1B-203ENST00000554636 GLI2P10070 1586 aa6.93□□□□□ -1.3
VTI1B-203ENST00000554636 PPRC1Q5VV67 1664 aaKnown RBP6.93□□□□□ -1.3
VTI1B-203ENST00000554636 SENP3-EIF4A1A0A087X0R7 540 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 IL2RAP01589 272 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 RNF144AP50876 292 aaPredicted RBP6.92□□□□□ -1.3
VTI1B-203ENST00000554636 POU4F2Q12837 409 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 USP4Q13107 963 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 CLN3Q13286 438 aa6.92□□□□□ -1.3
VTI1B-203ENST00000554636 WIPF1O43516 503 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 GNRH1P01148 92 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 SKIP12755 728 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 ALG2Q9H553 416 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 TSPOAP1O95153 1857 aa6.91□□□□□ -1.3
VTI1B-203ENST00000554636 EPRSP07814 1512 aaKnown RBP6.91□□□□□ -1.3
VTI1B-203ENST00000554636 ITGA6P23229 1130 aa6.9□□□□□ -1.3
VTI1B-203ENST00000554636 PHKA2P46019 1235 aa6.9□□□□□ -1.3
VTI1B-203ENST00000554636 FAM9AQ8IZU1 332 aaPredicted RBP6.9□□□□□ -1.3
VTI1B-203ENST00000554636 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
VTI1B-203ENST00000554636 GPR161Q8N6U8 529 aaKnown RBP6.9□□□□□ -1.3
VTI1B-203ENST00000554636 ADAMTS19Q8TE59 1207 aa6.9□□□□□ -1.3
VTI1B-203ENST00000554636 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.3
VTI1B-203ENST00000554636 WDR7Q9Y4E6 1490 aa6.9□□□□□ -1.31
VTI1B-203ENST00000554636 MAP3K4Q9Y6R4 1608 aa6.9□□□□□ -1.31
VTI1B-203ENST00000554636 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
VTI1B-203ENST00000554636 INSM1Q01101 510 aaPredicted RBP6.89□□□□□ -1.31
VTI1B-203ENST00000554636 CENPCQ03188 943 aa6.89□□□□□ -1.31
VTI1B-203ENST00000554636 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
VTI1B-203ENST00000554636 PROSER2Q86WR7 435 aaPredicted RBP6.89□□□□□ -1.31
VTI1B-203ENST00000554636 VWA5B2Q8N398 1253 aa6.89□□□□□ -1.31
VTI1B-203ENST00000554636 GAS2L1Q99501 681 aaPredicted RBP6.89□□□□□ -1.31
VTI1B-203ENST00000554636 CUEDC1Q9NWM3 386 aaPredicted RBP6.89□□□□□ -1.31
VTI1B-203ENST00000554636 KDM6BO15054 1643 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 RAPGEF6Q8TEU7 1601 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 EFCAB5A4FU69 1503 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 FHOD3Q2V2M9 1422 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 GPC1P35052 558 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 MAP7D1Q3KQU3 841 aa6.88□□□□□ -1.31
VTI1B-203ENST00000554636 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms