RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 RXRBP28702 533 aa12.54□□□□□ -0.4
MARK3-208ENST00000554627 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
MARK3-208ENST00000554627 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
MARK3-208ENST00000554627 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
MARK3-208ENST00000554627 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
MARK3-208ENST00000554627 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
MARK3-208ENST00000554627 BCL9O00512 1426 aa12.52□□□□□ -0.4
MARK3-208ENST00000554627 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.4
MARK3-208ENST00000554627 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.4
MARK3-208ENST00000554627 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.4
MARK3-208ENST00000554627 CABP4P57796 275 aa12.52□□□□□ -0.41
MARK3-208ENST00000554627 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
MARK3-208ENST00000554627 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
MARK3-208ENST00000554627 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
MARK3-208ENST00000554627 RGS12O14924 1447 aa12.51□□□□□ -0.41
MARK3-208ENST00000554627 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
MARK3-208ENST00000554627 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
MARK3-208ENST00000554627 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
MARK3-208ENST00000554627 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
MARK3-208ENST00000554627 CHL1O00533 1208 aa12.5□□□□□ -0.41
MARK3-208ENST00000554627 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
MARK3-208ENST00000554627 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
MARK3-208ENST00000554627 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
MARK3-208ENST00000554627 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
MARK3-208ENST00000554627 C5P01031 1676 aa12.5□□□□□ -0.41
MARK3-208ENST00000554627 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
MARK3-208ENST00000554627 BTBD11A6QL63 1104 aa12.49□□□□□ -0.41
MARK3-208ENST00000554627 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
MARK3-208ENST00000554627 LY75O60449 1722 aa12.49□□□□□ -0.41
MARK3-208ENST00000554627 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
MARK3-208ENST00000554627 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
MARK3-208ENST00000554627 TTC5Q8N0Z6 440 aa12.48□□□□□ -0.41
MARK3-208ENST00000554627 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
MARK3-208ENST00000554627 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
MARK3-208ENST00000554627 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
MARK3-208ENST00000554627 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
MARK3-208ENST00000554627 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
MARK3-208ENST00000554627 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
MARK3-208ENST00000554627 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
MARK3-208ENST00000554627 SOS1Q07889 1333 aaPredicted RBP12.47□□□□□ -0.41
MARK3-208ENST00000554627 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
MARK3-208ENST00000554627 TNS1Q9HBL0 1735 aaKnown RBP12.46□□□□□ -0.41
MARK3-208ENST00000554627 EP400Q96L91 3159 aa12.46□□□□□ -0.41
MARK3-208ENST00000554627 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.41
MARK3-208ENST00000554627 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.41
MARK3-208ENST00000554627 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.42
MARK3-208ENST00000554627 SYTL4Q96C24 671 aaPredicted RBP12.46□□□□□ -0.42
MARK3-208ENST00000554627 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
MARK3-208ENST00000554627 TJP1Q07157 1748 aa12.45□□□□□ -0.42
MARK3-208ENST00000554627 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
MARK3-208ENST00000554627 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
MARK3-208ENST00000554627 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
MARK3-208ENST00000554627 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
MARK3-208ENST00000554627 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
MARK3-208ENST00000554627 HOXB7P09629 217 aa12.43□□□□□ -0.42
MARK3-208ENST00000554627 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
MARK3-208ENST00000554627 FMNL2Q96PY5 1086 aa12.43□□□□□ -0.42
MARK3-208ENST00000554627 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
MARK3-208ENST00000554627 TWISTNBQ3B726 338 aaPredicted RBP12.43□□□□□ -0.42
MARK3-208ENST00000554627 PIGBQ92521 554 aa12.43□□□□□ -0.42
MARK3-208ENST00000554627 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
MARK3-208ENST00000554627 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
MARK3-208ENST00000554627 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
MARK3-208ENST00000554627 N4BP2Q86UW6 1770 aaPredicted RBP12.41□□□□□ -0.42
MARK3-208ENST00000554627 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
MARK3-208ENST00000554627 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
MARK3-208ENST00000554627 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
MARK3-208ENST00000554627 RREB1Q92766 1687 aa12.4□□□□□ -0.42
MARK3-208ENST00000554627 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
MARK3-208ENST00000554627 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 C8orf58Q8NAV2 365 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 PALLDQ8WX93 1383 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 KCNQ3O43525 872 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 KCNQ2O43526 872 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
MARK3-208ENST00000554627 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
MARK3-208ENST00000554627 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
MARK3-208ENST00000554627 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
MARK3-208ENST00000554627 VAMP4O75379 141 aa12.38□□□□□ -0.43
MARK3-208ENST00000554627 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
MARK3-208ENST00000554627 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
MARK3-208ENST00000554627 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
MARK3-208ENST00000554627 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
MARK3-208ENST00000554627 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
MARK3-208ENST00000554627 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
MARK3-208ENST00000554627 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
MARK3-208ENST00000554627 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
MARK3-208ENST00000554627 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
MARK3-208ENST00000554627 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.37□□□□□ -0.43
MARK3-208ENST00000554627 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
MARK3-208ENST00000554627 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
MARK3-208ENST00000554627 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
MARK3-208ENST00000554627 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
MARK3-208ENST00000554627 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
MARK3-208ENST00000554627 TRIM37O94972 964 aa12.35□□□□□ -0.43
MARK3-208ENST00000554627 AFDNP55196 1824 aaKnown RBP12.35□□□□□ -0.43
MARK3-208ENST00000554627 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
MARK3-208ENST00000554627 C4BP0C0L5 1744 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms