RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
CFAP54-206ENST00000554621 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
CFAP54-206ENST00000554621 TOMM70O94826 608 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 RFC4P35249 363 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 ITPK1Q13572 414 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
CFAP54-206ENST00000554621 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 TOGARAM1Q9Y4F4 1720 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
CFAP54-206ENST00000554621 KIF3CO14782 793 aa20.05■□□□□ 0.8
CFAP54-206ENST00000554621 ATG3Q9NT62 314 aa20.05■□□□□ 0.8
CFAP54-206ENST00000554621 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
CFAP54-206ENST00000554621 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
CFAP54-206ENST00000554621 PLEKHG2Q9H7P9 1386 aa20.04■□□□□ 0.8
CFAP54-206ENST00000554621 CEP350Q5VT06 3117 aa20.03■□□□□ 0.8
CFAP54-206ENST00000554621 FCHSD2O94868 740 aa20.03■□□□□ 0.8
CFAP54-206ENST00000554621 PLEKHO1Q53GL0 409 aaPredicted RBP20.03■□□□□ 0.8
CFAP54-206ENST00000554621 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
CFAP54-206ENST00000554621 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
CFAP54-206ENST00000554621 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
CFAP54-206ENST00000554621 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
CFAP54-206ENST00000554621 CABP4P57796 275 aa20.01■□□□□ 0.79
CFAP54-206ENST00000554621 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
CFAP54-206ENST00000554621 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
CFAP54-206ENST00000554621 AMOTQ4VCS5 1084 aa20■□□□□ 0.79
CFAP54-206ENST00000554621 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
CFAP54-206ENST00000554621 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
CFAP54-206ENST00000554621 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
CFAP54-206ENST00000554621 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
CFAP54-206ENST00000554621 C1orf141Q5JVX7 400 aa19.99■□□□□ 0.79
CFAP54-206ENST00000554621 CNTNAP4Q9C0A0 1308 aa19.99■□□□□ 0.79
CFAP54-206ENST00000554621 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
CFAP54-206ENST00000554621 DPEP1P16444 411 aa19.98■□□□□ 0.79
CFAP54-206ENST00000554621 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
CFAP54-206ENST00000554621 PIM2Q9P1W9 311 aa19.98■□□□□ 0.79
CFAP54-206ENST00000554621 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
CFAP54-206ENST00000554621 C10orf71Q711Q0 1435 aa19.96■□□□□ 0.79
CFAP54-206ENST00000554621 GYS1P13807 737 aa19.96■□□□□ 0.79
CFAP54-206ENST00000554621 MTHFSP49914 203 aa19.96■□□□□ 0.79
CFAP54-206ENST00000554621 ZNF530Q6P9A1 599 aaPredicted RBP19.96■□□□□ 0.79
CFAP54-206ENST00000554621 ANKRD26Q9UPS8 1709 aa19.96■□□□□ 0.79
CFAP54-206ENST00000554621 DALRD3Q5D0E6 543 aaKnown RBP19.95■□□□□ 0.78
CFAP54-206ENST00000554621 RBM46Q8TBY0 533 aaKnown RBP19.95■□□□□ 0.78
CFAP54-206ENST00000554621 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CFAP54-206ENST00000554621 KDRP35968 1356 aa19.95■□□□□ 0.78
CFAP54-206ENST00000554621 C9orf131Q5VYM1 1079 aa19.94■□□□□ 0.78
CFAP54-206ENST00000554621 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
CFAP54-206ENST00000554621 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
CFAP54-206ENST00000554621 N4BP2Q86UW6 1770 aaPredicted RBP19.93■□□□□ 0.78
CFAP54-206ENST00000554621 KIF13BQ9NQT8 1826 aa19.92■□□□□ 0.78
CFAP54-206ENST00000554621 FSTL1Q12841 308 aa19.92■□□□□ 0.78
CFAP54-206ENST00000554621 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
CFAP54-206ENST00000554621 C4AP0C0L4 1744 aa19.91■□□□□ 0.78
CFAP54-206ENST00000554621 ZPR1O75312 459 aa19.91■□□□□ 0.78
CFAP54-206ENST00000554621 CRKLP46109 303 aaKnown RBP19.9■□□□□ 0.78
CFAP54-206ENST00000554621 SLC4A9Q96Q91 983 aa19.9■□□□□ 0.78
CFAP54-206ENST00000554621 RNF181Q9P0P0 153 aa19.9■□□□□ 0.78
CFAP54-206ENST00000554621 DNAJC5GQ8N7S2 189 aa19.88■□□□□ 0.77
CFAP54-206ENST00000554621 NFATC2IPQ8NCF5 419 aa19.88■□□□□ 0.77
CFAP54-206ENST00000554621 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
CFAP54-206ENST00000554621 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
CFAP54-206ENST00000554621 KCNA3P22001 575 aa19.85■□□□□ 0.77
CFAP54-206ENST00000554621 FKBP8Q14318 412 aa19.85■□□□□ 0.77
CFAP54-206ENST00000554621 KLRG1Q96E93 195 aa19.85■□□□□ 0.77
CFAP54-206ENST00000554621 RRAGCQ9HB90 399 aa19.85■□□□□ 0.77
CFAP54-206ENST00000554621 SRP68Q9UHB9 627 aaKnown RBP19.85■□□□□ 0.77
CFAP54-206ENST00000554621 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
CFAP54-206ENST00000554621 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
CFAP54-206ENST00000554621 SULT6B1Q6IMI4 303 aa19.84■□□□□ 0.77
CFAP54-206ENST00000554621 SMC1BQ8NDV3 1235 aa19.84■□□□□ 0.77
CFAP54-206ENST00000554621 PANK3Q9H999 370 aa19.84■□□□□ 0.77
CFAP54-206ENST00000554621 KIAA1551Q9HCM1 1747 aa19.84■□□□□ 0.77
CFAP54-206ENST00000554621 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
CFAP54-206ENST00000554621 ZC3H4Q9UPT8 1303 aaKnown RBP19.82■□□□□ 0.76
CFAP54-206ENST00000554621 ARFGEF1Q9Y6D6 1849 aa19.82■□□□□ 0.76
CFAP54-206ENST00000554621 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
CFAP54-206ENST00000554621 CHRNA5P30532 468 aa19.81■□□□□ 0.76
CFAP54-206ENST00000554621 AKAP4Q5JQC9 854 aa19.81■□□□□ 0.76
CFAP54-206ENST00000554621 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
CFAP54-206ENST00000554621 KCPQ6ZWJ8 1503 aa19.81■□□□□ 0.76
CFAP54-206ENST00000554621 WDR90Q96KV7 1748 aa19.8■□□□□ 0.76
CFAP54-206ENST00000554621 DDR1Q08345 913 aa19.8■□□□□ 0.76
CFAP54-206ENST00000554621 USPL1Q5W0Q7 1092 aa19.8■□□□□ 0.76
CFAP54-206ENST00000554621 POLRMTO00411 1230 aaKnown RBP19.79■□□□□ 0.76
CFAP54-206ENST00000554621 TM4SF1P30408 202 aa19.79■□□□□ 0.76
CFAP54-206ENST00000554621 AEBP1Q8IUX7 1158 aa19.79■□□□□ 0.76
CFAP54-206ENST00000554621 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
CFAP54-206ENST00000554621 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
CFAP54-206ENST00000554621 LMNB1P20700 586 aa19.78■□□□□ 0.76
CFAP54-206ENST00000554621 INTS5Q6P9B9 1019 aaKnown RBP19.78■□□□□ 0.76
CFAP54-206ENST00000554621 JMYQ8N9B5 988 aa19.78■□□□□ 0.76
CFAP54-206ENST00000554621 DNAJC10Q8IXB1 793 aa19.77■□□□□ 0.76
CFAP54-206ENST00000554621 SLC52A2Q9HAB3 445 aa19.77■□□□□ 0.76
CFAP54-206ENST00000554621 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
CFAP54-206ENST00000554621 MYH14Q7Z406 1995 aaKnown RBP19.76■□□□□ 0.75
CFAP54-206ENST00000554621 H0YIN7 160 aa19.76■□□□□ 0.75
CFAP54-206ENST00000554621 DPY19L2Q6NUT2 758 aa19.76■□□□□ 0.75
CFAP54-206ENST00000554621 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
CFAP54-206ENST00000554621 TTLL6Q8N841 843 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms