RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 GNPATO15228 680 aa30.48■■■□□ 2.47
GABRB3-206ENST00000554556 GIGYF1O75420 1035 aaPredicted RBP30.48■■■□□ 2.47
GABRB3-206ENST00000554556 ITPK1Q13572 414 aa30.48■■■□□ 2.47
GABRB3-206ENST00000554556 SMIM5Q71RC9 77 aa30.48■■■□□ 2.47
GABRB3-206ENST00000554556 MORC1Q86VD1 984 aa30.48■■■□□ 2.47
GABRB3-206ENST00000554556 AMOTQ4VCS5 1084 aa30.47■■■□□ 2.47
GABRB3-206ENST00000554556 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
GABRB3-206ENST00000554556 DCAF5Q96JK2 942 aa30.47■■■□□ 2.47
GABRB3-206ENST00000554556 SENP3-EIF4A1A0A087X0R7 540 aa30.44■■■□□ 2.46
GABRB3-206ENST00000554556 ZNF530Q6P9A1 599 aaPredicted RBP30.43■■■□□ 2.46
GABRB3-206ENST00000554556 RBM42Q9BTD8 480 aaKnown RBP30.43■■■□□ 2.46
GABRB3-206ENST00000554556 KNSTRNQ9Y448 316 aa30.43■■■□□ 2.46
GABRB3-206ENST00000554556 RTCBQ9Y3I0 505 aaKnown RBP30.42■■■□□ 2.46
GABRB3-206ENST00000554556 CABP4P57796 275 aa30.41■■■□□ 2.46
GABRB3-206ENST00000554556 C1orf141Q5JVX7 400 aa30.4■■■□□ 2.46
GABRB3-206ENST00000554556 TRAPPC3LQ5T215 181 aa30.4■■■□□ 2.46
GABRB3-206ENST00000554556 ZNF831Q5JPB2 1677 aa30.39■■■□□ 2.45
GABRB3-206ENST00000554556 MTHFSP49914 203 aa30.38■■■□□ 2.45
GABRB3-206ENST00000554556 RC3H1Q5TC82 1133 aaKnown RBP30.38■■■□□ 2.45
GABRB3-206ENST00000554556 KDRP35968 1356 aa30.38■■■□□ 2.45
GABRB3-206ENST00000554556 NLGN1Q8N2Q7 840 aa30.36■■■□□ 2.45
GABRB3-206ENST00000554556 MMP10P09238 476 aa30.35■■■□□ 2.45
GABRB3-206ENST00000554556 ADRA2BP18089 450 aa30.35■■■□□ 2.45
GABRB3-206ENST00000554556 SULT6B1Q6IMI4 303 aa30.35■■■□□ 2.45
GABRB3-206ENST00000554556 SLC4A9Q96Q91 983 aa30.35■■■□□ 2.45
GABRB3-206ENST00000554556 AEBP1Q8IUX7 1158 aa30.34■■■□□ 2.45
GABRB3-206ENST00000554556 KDM6AO15550 1401 aaPredicted RBP30.33■■■□□ 2.45
GABRB3-206ENST00000554556 CNTNAP4Q9C0A0 1308 aa30.33■■■□□ 2.45
GABRB3-206ENST00000554556 ATP10DQ9P241 1426 aa30.32■■■□□ 2.44
GABRB3-206ENST00000554556 RPS6KA4O75676 772 aa30.32■■■□□ 2.44
GABRB3-206ENST00000554556 RFC4P35249 363 aa30.31■■■□□ 2.44
GABRB3-206ENST00000554556 ARHGEF1Q92888 912 aaKnown RBP30.31■■■□□ 2.44
GABRB3-206ENST00000554556 COL5A3P25940 1745 aaPredicted RBP30.3■■■□□ 2.44
GABRB3-206ENST00000554556 IL13P35225 146 aa30.3■■■□□ 2.44
GABRB3-206ENST00000554556 WWC3Q9ULE0 1092 aa30.3■■■□□ 2.44
GABRB3-206ENST00000554556 GOLGB1Q14789 3259 aaKnown RBP30.29■■■□□ 2.44
GABRB3-206ENST00000554556 NFATC2IPQ8NCF5 419 aa30.29■■■□□ 2.44
GABRB3-206ENST00000554556 GPBP1L1Q9HC44 474 aaPredicted RBP30.29■■■□□ 2.44
GABRB3-206ENST00000554556 PTCD1O75127 700 aaKnown RBP30.28■■■□□ 2.44
GABRB3-206ENST00000554556 TGFB2P61812 414 aa30.28■■■□□ 2.44
GABRB3-206ENST00000554556 AMER1Q5JTC6 1135 aaPredicted RBP30.26■■■□□ 2.43
GABRB3-206ENST00000554556 KIF13BQ9NQT8 1826 aa30.26■■■□□ 2.43
GABRB3-206ENST00000554556 CCDC87Q9NVE4 849 aa30.25■■■□□ 2.43
GABRB3-206ENST00000554556 MYH14Q7Z406 1995 aaKnown RBP30.24■■■□□ 2.43
GABRB3-206ENST00000554556 GYS1P13807 737 aa30.24■■■□□ 2.43
GABRB3-206ENST00000554556 AKAP4Q5JQC9 854 aa30.24■■■□□ 2.43
GABRB3-206ENST00000554556 PARP3Q9Y6F1 533 aa30.24■■■□□ 2.43
GABRB3-206ENST00000554556 ADCY9O60503 1353 aa30.24■■■□□ 2.43
GABRB3-206ENST00000554556 CICQ96RK0 1608 aaPredicted RBP30.23■■■□□ 2.43
GABRB3-206ENST00000554556 SCN11AQ9UI33 1791 aa30.23■■■□□ 2.43
GABRB3-206ENST00000554556 CRKLP46109 303 aaKnown RBP30.22■■■□□ 2.43
GABRB3-206ENST00000554556 KIF7Q2M1P5 1343 aa30.21■■■□□ 2.43
GABRB3-206ENST00000554556 PXDNLA1KZ92 1463 aa30.2■■■□□ 2.43
GABRB3-206ENST00000554556 ZNF526Q8TF50 670 aaPredicted RBP30.2■■■□□ 2.43
GABRB3-206ENST00000554556 N4BP2Q86UW6 1770 aaPredicted RBP30.2■■■□□ 2.42
GABRB3-206ENST00000554556 C4AP0C0L4 1744 aa30.19■■■□□ 2.42
GABRB3-206ENST00000554556 A0A0G2JLW4 131 aa30.19■■■□□ 2.42
GABRB3-206ENST00000554556 BCS1LQ9Y276 419 aa30.19■■■□□ 2.42
GABRB3-206ENST00000554556 C10orf71Q711Q0 1435 aa30.18■■■□□ 2.42
GABRB3-206ENST00000554556 SLC52A2Q9HAB3 445 aa30.17■■■□□ 2.42
GABRB3-206ENST00000554556 KIAA1551Q9HCM1 1747 aa30.16■■■□□ 2.42
GABRB3-206ENST00000554556 HMOX1P09601 288 aa30.15■■■□□ 2.42
GABRB3-206ENST00000554556 DPEP1P16444 411 aa30.14■■■□□ 2.42
GABRB3-206ENST00000554556 LGR6Q9HBX8 967 aa30.14■■■□□ 2.42
GABRB3-206ENST00000554556 TJP1Q07157 1748 aa30.13■■■□□ 2.41
GABRB3-206ENST00000554556 PER1O15534 1290 aaPredicted RBP30.13■■■□□ 2.41
GABRB3-206ENST00000554556 RNMTO43148 476 aaKnown RBP30.13■■■□□ 2.41
GABRB3-206ENST00000554556 DIAPH1O60610 1272 aaKnown RBP30.13■■■□□ 2.41
GABRB3-206ENST00000554556 USP42Q9H9J4 1324 aaKnown RBP30.13■■■□□ 2.41
GABRB3-206ENST00000554556 FCHSD2O94868 740 aa30.12■■■□□ 2.41
GABRB3-206ENST00000554556 SRP68Q9UHB9 627 aaKnown RBP30.12■■■□□ 2.41
GABRB3-206ENST00000554556 VIRMAQ69YN4 1812 aaKnown RBP30.11■■■□□ 2.41
GABRB3-206ENST00000554556 CC2D1BQ5T0F9 858 aaKnown RBP30.11■■■□□ 2.41
GABRB3-206ENST00000554556 INTS5Q6P9B9 1019 aaKnown RBP30.11■■■□□ 2.41
GABRB3-206ENST00000554556 ARHGAP27Q6ZUM4 889 aa30.11■■■□□ 2.41
GABRB3-206ENST00000554556 FKBP8Q14318 412 aa30.1■■■□□ 2.41
GABRB3-206ENST00000554556 DNAJC10Q8IXB1 793 aa30.1■■■□□ 2.41
GABRB3-206ENST00000554556 ZPR1O75312 459 aa30.09■■■□□ 2.41
GABRB3-206ENST00000554556 PIM2Q9P1W9 311 aa30.08■■■□□ 2.41
GABRB3-206ENST00000554556 MTHFSDQ2M296 383 aaKnown RBP30.07■■■□□ 2.4
GABRB3-206ENST00000554556 BRCA1P38398 1863 aaKnown RBP30.07■■■□□ 2.4
GABRB3-206ENST00000554556 SLC39A6Q13433 755 aa30.06■■■□□ 2.4
GABRB3-206ENST00000554556 MRC1P22897 1456 aa30.06■■■□□ 2.4
GABRB3-206ENST00000554556 CYP19A1P11511 503 aaPredicted RBP30.05■■■□□ 2.4
GABRB3-206ENST00000554556 HSPA6P17066 643 aa30.05■■■□□ 2.4
GABRB3-206ENST00000554556 KCNA3P22001 575 aa30.05■■■□□ 2.4
GABRB3-206ENST00000554556 DDR1Q08345 913 aa30.04■■■□□ 2.4
GABRB3-206ENST00000554556 ARFGEF1Q9Y6D6 1849 aa30.03■■■□□ 2.4
GABRB3-206ENST00000554556 SOS1Q07889 1333 aaPredicted RBP30.03■■■□□ 2.4
GABRB3-206ENST00000554556 KIF3CO14782 793 aa30.03■■■□□ 2.4
GABRB3-206ENST00000554556 TM4SF1P30408 202 aa30.03■■■□□ 2.4
GABRB3-206ENST00000554556 USPL1Q5W0Q7 1092 aa30.03■■■□□ 2.4
GABRB3-206ENST00000554556 VSIG10Q8N0Z9 540 aa30.03■■■□□ 2.4
GABRB3-206ENST00000554556 DALRD3Q5D0E6 543 aaKnown RBP30.02■■■□□ 2.4
GABRB3-206ENST00000554556 NPC1L1Q9UHC9 1359 aa30.02■■■□□ 2.4
GABRB3-206ENST00000554556 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
GABRB3-206ENST00000554556 NARFQ9UHQ1 456 aa30■■■□□ 2.39
GABRB3-206ENST00000554556 ADAMTS7Q9UKP4 1686 aa30■■■□□ 2.39
GABRB3-206ENST00000554556 KCPQ6ZWJ8 1503 aa29.98■■■□□ 2.39
GABRB3-206ENST00000554556 U2SURPO15042 1029 aaKnown RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms