RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 COL24A1Q17RW2 1714 aa10.19□□□□□ -0.78
LINC00640-201ENST00000554409 ZNF831Q5JPB2 1677 aa10.19□□□□□ -0.78
LINC00640-201ENST00000554409 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00640-201ENST00000554409 AMOTQ4VCS5 1084 aa10.19□□□□□ -0.78
LINC00640-201ENST00000554409 PLEKHO1Q53GL0 409 aaPredicted RBP10.19□□□□□ -0.78
LINC00640-201ENST00000554409 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
LINC00640-201ENST00000554409 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
LINC00640-201ENST00000554409 DIAPH1O60610 1272 aaKnown RBP10.18□□□□□ -0.78
LINC00640-201ENST00000554409 SULT6B1Q6IMI4 303 aa10.18□□□□□ -0.78
LINC00640-201ENST00000554409 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
LINC00640-201ENST00000554409 AEBP1Q8IUX7 1158 aa10.18□□□□□ -0.78
LINC00640-201ENST00000554409 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
LINC00640-201ENST00000554409 KDM6AO15550 1401 aaPredicted RBP10.17□□□□□ -0.78
LINC00640-201ENST00000554409 HSP90AB1P08238 724 aaKnown RBP10.17□□□□□ -0.78
LINC00640-201ENST00000554409 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
LINC00640-201ENST00000554409 ZNF827Q17R98 1081 aa10.17□□□□□ -0.78
LINC00640-201ENST00000554409 PIGBQ92521 554 aa10.17□□□□□ -0.78
LINC00640-201ENST00000554409 SMARCC1Q92922 1105 aaPredicted RBP10.17□□□□□ -0.78
LINC00640-201ENST00000554409 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
LINC00640-201ENST00000554409 SPON1Q9HCB6 807 aa10.17□□□□□ -0.78
LINC00640-201ENST00000554409 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
LINC00640-201ENST00000554409 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
LINC00640-201ENST00000554409 CICQ96RK0 1608 aaPredicted RBP10.16□□□□□ -0.78
LINC00640-201ENST00000554409 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
LINC00640-201ENST00000554409 ZNF530Q6P9A1 599 aaPredicted RBP10.16□□□□□ -0.78
LINC00640-201ENST00000554409 PDGFDQ9GZP0 370 aaPredicted RBP10.16□□□□□ -0.78
LINC00640-201ENST00000554409 TMOD3Q9NYL9 352 aa10.16□□□□□ -0.78
LINC00640-201ENST00000554409 UBR3Q6ZT12 1888 aa10.15□□□□□ -0.78
LINC00640-201ENST00000554409 COL5A3P25940 1745 aaPredicted RBP10.15□□□□□ -0.78
LINC00640-201ENST00000554409 MRC1P22897 1456 aa10.15□□□□□ -0.78
LINC00640-201ENST00000554409 PNPLA7Q6ZV29 1317 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 KCNQ4P56696 695 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
LINC00640-201ENST00000554409 HMOX1P09601 288 aa10.13□□□□□ -0.79
LINC00640-201ENST00000554409 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
LINC00640-201ENST00000554409 PTGER2P43116 358 aa10.13□□□□□ -0.79
LINC00640-201ENST00000554409 AKAP4Q5JQC9 854 aa10.13□□□□□ -0.79
LINC00640-201ENST00000554409 SLC16A10Q8TF71 515 aa10.13□□□□□ -0.79
LINC00640-201ENST00000554409 TFCP2L1Q9NZI6 479 aa10.13□□□□□ -0.79
LINC00640-201ENST00000554409 LOC102724428A0A0B4J2F2 783 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 ZBTB7AO95365 584 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 SIK1P57059 783 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
LINC00640-201ENST00000554409 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 ATG3Q9NT62 314 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 ASAP1Q9ULH1 1129 aa10.12□□□□□ -0.79
LINC00640-201ENST00000554409 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
LINC00640-201ENST00000554409 TJP1Q07157 1748 aa10.11□□□□□ -0.79
LINC00640-201ENST00000554409 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
LINC00640-201ENST00000554409 CABP4P57796 275 aa10.11□□□□□ -0.79
LINC00640-201ENST00000554409 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
LINC00640-201ENST00000554409 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
LINC00640-201ENST00000554409 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
LINC00640-201ENST00000554409 MTHFSDQ2M296 383 aaKnown RBP10.1□□□□□ -0.79
LINC00640-201ENST00000554409 FLAD1Q8NFF5 587 aa10.1□□□□□ -0.79
LINC00640-201ENST00000554409 PPP1R1BQ9UD71 204 aaPredicted RBP10.1□□□□□ -0.79
LINC00640-201ENST00000554409 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
LINC00640-201ENST00000554409 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 AK7Q96M32 723 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 SLC52A2Q9HAB3 445 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 MAP3K5Q99683 1374 aa10.09□□□□□ -0.79
LINC00640-201ENST00000554409 RNMTO43148 476 aaKnown RBP10.08□□□□□ -0.8
LINC00640-201ENST00000554409 ITPK1Q13572 414 aa10.08□□□□□ -0.8
LINC00640-201ENST00000554409 COL23A1Q86Y22 540 aaPredicted RBP10.08□□□□□ -0.8
LINC00640-201ENST00000554409 NFATC2IPQ8NCF5 419 aa10.08□□□□□ -0.8
LINC00640-201ENST00000554409 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
LINC00640-201ENST00000554409 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
LINC00640-201ENST00000554409 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 FCHSD2O94868 740 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 SSFA2P28290 1259 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 RALBP1Q15311 655 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
LINC00640-201ENST00000554409 MYH14Q7Z406 1995 aaKnown RBP10.06□□□□□ -0.8
LINC00640-201ENST00000554409 CEMIPQ8WUJ3 1361 aa10.06□□□□□ -0.8
LINC00640-201ENST00000554409 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
LINC00640-201ENST00000554409 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
LINC00640-201ENST00000554409 POLD1P28340 1107 aa10.06□□□□□ -0.8
LINC00640-201ENST00000554409 PRKAR2BP31323 418 aa10.06□□□□□ -0.8
LINC00640-201ENST00000554409 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00640-201ENST00000554409 DDX10Q13206 875 aaKnown RBP10.06□□□□□ -0.8
LINC00640-201ENST00000554409 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
LINC00640-201ENST00000554409 ARXQ96QS3 562 aa10.06□□□□□ -0.8
LINC00640-201ENST00000554409 DLG5Q8TDM6 1919 aa10.05□□□□□ -0.8
LINC00640-201ENST00000554409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
LINC00640-201ENST00000554409 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
LINC00640-201ENST00000554409 AMIGO3Q86WK7 504 aa10.05□□□□□ -0.8
LINC00640-201ENST00000554409 PHACTR3Q96KR7 559 aa10.05□□□□□ -0.8
LINC00640-201ENST00000554409 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
LINC00640-201ENST00000554409 GNPATO15228 680 aa10.04□□□□□ -0.8
LINC00640-201ENST00000554409 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
LINC00640-201ENST00000554409 IL17REQ8NFR9 667 aa10.04□□□□□ -0.8
LINC00640-201ENST00000554409 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms