RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
PTCD2P1-201ENST00000554393 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
PTCD2P1-201ENST00000554393 HSP90AB1P08238 724 aaKnown RBP14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 MTHFSP49914 203 aa14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
PTCD2P1-201ENST00000554393 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 ZBTB7AO95365 584 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 PTGER2P43116 358 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 SLC16A10Q8TF71 515 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 PIGBQ92521 554 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
PTCD2P1-201ENST00000554393 FKBP8Q14318 412 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 AEBP1Q8IUX7 1158 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
PTCD2P1-201ENST00000554393 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 KCNQ4P56696 695 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 TFCP2L1Q9NZI6 479 aa14.08□□□□□ -0.16
PTCD2P1-201ENST00000554393 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
PTCD2P1-201ENST00000554393 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
PTCD2P1-201ENST00000554393 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
PTCD2P1-201ENST00000554393 ZNF530Q6P9A1 599 aaPredicted RBP14.07□□□□□ -0.16
PTCD2P1-201ENST00000554393 ADAMTS7Q9UKP4 1686 aa14.07□□□□□ -0.16
PTCD2P1-201ENST00000554393 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
PTCD2P1-201ENST00000554393 C1orf141Q5JVX7 400 aa14.06□□□□□ -0.16
PTCD2P1-201ENST00000554393 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
PTCD2P1-201ENST00000554393 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
PTCD2P1-201ENST00000554393 LOC102724428A0A0B4J2F2 783 aa14.05□□□□□ -0.16
PTCD2P1-201ENST00000554393 SIK1P57059 783 aa14.05□□□□□ -0.16
PTCD2P1-201ENST00000554393 POTEHQ6S545 545 aa14.05□□□□□ -0.16
PTCD2P1-201ENST00000554393 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
PTCD2P1-201ENST00000554393 MAP3K5Q99683 1374 aa14.05□□□□□ -0.16
PTCD2P1-201ENST00000554393 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
PTCD2P1-201ENST00000554393 MRC1P22897 1456 aa14.04□□□□□ -0.16
PTCD2P1-201ENST00000554393 AKAP4Q5JQC9 854 aa14.03□□□□□ -0.16
PTCD2P1-201ENST00000554393 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
PTCD2P1-201ENST00000554393 CHD4Q14839 1912 aa14.03□□□□□ -0.16
PTCD2P1-201ENST00000554393 ARXQ96QS3 562 aa14.02□□□□□ -0.17
PTCD2P1-201ENST00000554393 HMOX1P09601 288 aa14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 POLD1P28340 1107 aa14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 CABP4P57796 275 aa14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 AK7Q96M32 723 aa14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
PTCD2P1-201ENST00000554393 SSFA2P28290 1259 aa14□□□□□ -0.17
PTCD2P1-201ENST00000554393 ATP6V1AP38606 617 aa14□□□□□ -0.17
PTCD2P1-201ENST00000554393 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
PTCD2P1-201ENST00000554393 TJP1Q07157 1748 aa13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 ITPK1Q13572 414 aa13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 SYT17Q9BSW7 474 aa13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
PTCD2P1-201ENST00000554393 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
PTCD2P1-201ENST00000554393 PPP2R1AP30153 589 aa13.98□□□□□ -0.17
PTCD2P1-201ENST00000554393 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
PTCD2P1-201ENST00000554393 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
PTCD2P1-201ENST00000554393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
PTCD2P1-201ENST00000554393 SLC34A2O95436 690 aa13.97□□□□□ -0.17
PTCD2P1-201ENST00000554393 MTHFSDQ2M296 383 aaKnown RBP13.97□□□□□ -0.17
PTCD2P1-201ENST00000554393 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
PTCD2P1-201ENST00000554393 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
PTCD2P1-201ENST00000554393 CNTNAP4Q9C0A0 1308 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 GAS2L2Q8NHY3 880 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 NUDCQ9Y266 331 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
PTCD2P1-201ENST00000554393 GNPATO15228 680 aa13.95□□□□□ -0.18
PTCD2P1-201ENST00000554393 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
PTCD2P1-201ENST00000554393 PHF14O94880 888 aa13.94□□□□□ -0.18
PTCD2P1-201ENST00000554393 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
PTCD2P1-201ENST00000554393 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
PTCD2P1-201ENST00000554393 RSPH6AQ9H0K4 717 aa13.93□□□□□ -0.18
PTCD2P1-201ENST00000554393 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
PTCD2P1-201ENST00000554393 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
PTCD2P1-201ENST00000554393 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
PTCD2P1-201ENST00000554393 MSL1Q68DK7 614 aa13.92□□□□□ -0.18
PTCD2P1-201ENST00000554393 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
PTCD2P1-201ENST00000554393 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 FCHSD2O94868 740 aa13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 CEMIPQ8WUJ3 1361 aa13.91□□□□□ -0.18
PTCD2P1-201ENST00000554393 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms