RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.88
PPP4R3A-202ENST00000554390 ZNF710Q8N1W2 664 aa20.58■□□□□ 0.88
PPP4R3A-202ENST00000554390 PRR36Q9H6K5 1346 aa20.57■□□□□ 0.88
PPP4R3A-202ENST00000554390 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
PPP4R3A-202ENST00000554390 CBX1P83916 185 aa20.57■□□□□ 0.88
PPP4R3A-202ENST00000554390 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
PPP4R3A-202ENST00000554390 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
PPP4R3A-202ENST00000554390 MBD3O95983 291 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 TSPY26PQ9H489 355 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
PPP4R3A-202ENST00000554390 PNMA6EA0A0J9YXQ4 647 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 LMOD3Q0VAK6 560 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 PRIMPOLQ96LW4 560 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 ZNF830Q96NB3 372 aaPredicted RBP20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 IL25Q9H293 177 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 TSPYL4Q9UJ04 414 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 RICTORQ6R327 1708 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 REREQ9P2R6 1566 aa20.54■□□□□ 0.88
PPP4R3A-202ENST00000554390 RGS12O14924 1447 aa20.53■□□□□ 0.88
PPP4R3A-202ENST00000554390 PDE1AP54750 535 aa20.53■□□□□ 0.88
PPP4R3A-202ENST00000554390 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
PPP4R3A-202ENST00000554390 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
PPP4R3A-202ENST00000554390 TMX3Q96JJ7 454 aa20.52■□□□□ 0.88
PPP4R3A-202ENST00000554390 ATP7BP35670 1465 aa20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 CHL1O00533 1208 aa20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 HMGN5P82970 282 aaKnown RBP20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 NOLC1Q14978 699 aaKnown RBP eCLIP20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 CASC1Q6TDU7 716 aa20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.87
PPP4R3A-202ENST00000554390 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
PPP4R3A-202ENST00000554390 ERC2O15083 957 aa20.51■□□□□ 0.87
PPP4R3A-202ENST00000554390 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
PPP4R3A-202ENST00000554390 RPAP2Q8IXW5 612 aaPredicted RBP20.51■□□□□ 0.87
PPP4R3A-202ENST00000554390 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.87
PPP4R3A-202ENST00000554390 ATP2B3Q16720 1220 aa20.5■□□□□ 0.87
PPP4R3A-202ENST00000554390 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
PPP4R3A-202ENST00000554390 GTPBP4Q9BZE4 634 aaKnown RBP20.5■□□□□ 0.87
PPP4R3A-202ENST00000554390 FAM69CQ0P6D2 419 aa20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 NUTM1Q86Y26 1132 aa20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 C17orf53Q8N3J3 647 aaPredicted RBP20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 DDX54Q8TDD1 881 aaKnown RBP20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
PPP4R3A-202ENST00000554390 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 KIF3AQ9Y496 699 aa20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 ACEP12821 1306 aa20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 TTC12Q9H892 705 aaPredicted RBP20.48■□□□□ 0.87
PPP4R3A-202ENST00000554390 REC8O95072 547 aa20.47■□□□□ 0.87
PPP4R3A-202ENST00000554390 CPA1P15085 419 aa20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 SYAP1Q96A49 352 aaPredicted RBP20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 BRD1O95696 1058 aa20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 USP25Q9UHP3 1055 aa20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 FGD1P98174 961 aa20.46■□□□□ 0.87
PPP4R3A-202ENST00000554390 KIF20AO95235 890 aa20.45■□□□□ 0.86
PPP4R3A-202ENST00000554390 LRRFIP2Q9Y608 721 aaKnown RBP20.45■□□□□ 0.86
PPP4R3A-202ENST00000554390 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
PPP4R3A-202ENST00000554390 A2ML1A8K2U0 1454 aa20.45■□□□□ 0.86
PPP4R3A-202ENST00000554390 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
PPP4R3A-202ENST00000554390 TTC21BQ7Z4L5 1316 aa20.44■□□□□ 0.86
PPP4R3A-202ENST00000554390 ANXA1P04083 346 aa20.44■□□□□ 0.86
PPP4R3A-202ENST00000554390 SPDYE4A6NLX3 237 aa20.43■□□□□ 0.86
PPP4R3A-202ENST00000554390 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
PPP4R3A-202ENST00000554390 LETM1O95202 739 aaPredicted RBP20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 ADCY5O95622 1261 aa20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 MX1P20591 662 aa20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 PLCB2Q00722 1185 aa20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 PHF14O94880 888 aa20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 UVSSAQ2YD98 709 aa20.42■□□□□ 0.86
PPP4R3A-202ENST00000554390 HMMRO75330 724 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 GNAI2P04899 355 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 EIF2S2P20042 333 aaKnown RBP20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 FAM184AQ8NB25 1140 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
PPP4R3A-202ENST00000554390 FLIIQ13045 1269 aa20.4■□□□□ 0.86
PPP4R3A-202ENST00000554390 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
PPP4R3A-202ENST00000554390 SPTLC3Q9NUV7 552 aa20.4■□□□□ 0.86
PPP4R3A-202ENST00000554390 RIMS1Q86UR5 1692 aaKnown RBP20.4■□□□□ 0.86
PPP4R3A-202ENST00000554390 AATKQ6ZMQ8 1374 aa20.4■□□□□ 0.86
PPP4R3A-202ENST00000554390 CHMLP26374 656 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 AMPHP49418 695 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 EYA1Q99502 592 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
PPP4R3A-202ENST00000554390 RBM33Q96EV2 1170 aaKnown RBP20.38■□□□□ 0.85
PPP4R3A-202ENST00000554390 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
PPP4R3A-202ENST00000554390 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
PPP4R3A-202ENST00000554390 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms