RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CFHP08603 1231 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 MYT1Q01538 1121 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 V9GY48 417 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-224ENST00000554040 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
ATXN3-224ENST00000554040 OATP04181 439 aa10.46□□□□□ -0.73
ATXN3-224ENST00000554040 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.73
ATXN3-224ENST00000554040 WAPLQ7Z5K2 1190 aa10.46□□□□□ -0.73
ATXN3-224ENST00000554040 RPGRIP1LQ68CZ1 1315 aa10.46□□□□□ -0.73
ATXN3-224ENST00000554040 SPHKAPQ2M3C7 1700 aa10.46□□□□□ -0.74
ATXN3-224ENST00000554040 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
ATXN3-224ENST00000554040 GNPATO15228 680 aa10.45□□□□□ -0.74
ATXN3-224ENST00000554040 PSME1Q06323 249 aa10.45□□□□□ -0.74
ATXN3-224ENST00000554040 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-224ENST00000554040 CAMKK2Q96RR4 588 aa10.45□□□□□ -0.74
ATXN3-224ENST00000554040 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
ATXN3-224ENST00000554040 Q6ZNB5 142 aa10.44□□□□□ -0.74
ATXN3-224ENST00000554040 UTRNP46939 3433 aa10.44□□□□□ -0.74
ATXN3-224ENST00000554040 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
ATXN3-224ENST00000554040 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 NAIPQ13075 1403 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 KMT5BQ4FZB7 885 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 SMYD5Q6GMV2 418 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 STK26Q9P289 416 aa10.43□□□□□ -0.74
ATXN3-224ENST00000554040 GFRA3O60609 400 aa10.42□□□□□ -0.74
ATXN3-224ENST00000554040 LMOD2Q6P5Q4 547 aa10.42□□□□□ -0.74
ATXN3-224ENST00000554040 BTG4Q9NY30 223 aa10.42□□□□□ -0.74
ATXN3-224ENST00000554040 CDC42BPGQ6DT37 1551 aa10.42□□□□□ -0.74
ATXN3-224ENST00000554040 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
ATXN3-224ENST00000554040 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
ATXN3-224ENST00000554040 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
ATXN3-224ENST00000554040 PHOX2BQ99453 314 aa10.41□□□□□ -0.74
ATXN3-224ENST00000554040 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
ATXN3-224ENST00000554040 SBNO1A3KN83 1393 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 SPATA31A5Q5VU36 1347 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 SPATA31A7Q8IWB4 1347 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 TRIM37O94972 964 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 APBA3O96018 575 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 GGCXP38435 758 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 ITGAEP38570 1179 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
ATXN3-224ENST00000554040 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 NBPF8Q3BBV2 869 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 SPON1Q9HCB6 807 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 PPP1R1BQ9UD71 204 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-224ENST00000554040 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
ATXN3-224ENST00000554040 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
ATXN3-224ENST00000554040 KCNQ2O43526 872 aa10.38□□□□□ -0.75
ATXN3-224ENST00000554040 TMEM132EQ6IEE7 984 aa10.38□□□□□ -0.75
ATXN3-224ENST00000554040 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
ATXN3-224ENST00000554040 TECPR2O15040 1411 aa10.38□□□□□ -0.75
ATXN3-224ENST00000554040 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
ATXN3-224ENST00000554040 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-224ENST00000554040 S1PR4O95977 384 aa10.37□□□□□ -0.75
ATXN3-224ENST00000554040 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-224ENST00000554040 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
ATXN3-224ENST00000554040 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-224ENST00000554040 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-224ENST00000554040 NINLQ9Y2I6 1382 aa10.36□□□□□ -0.75
ATXN3-224ENST00000554040 ADH1BP00325 375 aa10.35□□□□□ -0.75
ATXN3-224ENST00000554040 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
ATXN3-224ENST00000554040 TRIM67Q6ZTA4 783 aa10.35□□□□□ -0.75
ATXN3-224ENST00000554040 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 NR1I2O75469 434 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 PMFBP1Q8TBY8 1022 aa10.34□□□□□ -0.75
ATXN3-224ENST00000554040 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
ATXN3-224ENST00000554040 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
ATXN3-224ENST00000554040 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
ATXN3-224ENST00000554040 KIF1AQ12756 1690 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 KIF1BO60333 1816 aa10.32□□□□□ -0.76
ATXN3-224ENST00000554040 SLC19A1P41440 591 aa10.31□□□□□ -0.76
ATXN3-224ENST00000554040 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
ATXN3-224ENST00000554040 YTHDC2Q9H6S0 1430 aaKnown RBP10.31□□□□□ -0.76
ATXN3-224ENST00000554040 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
ATXN3-224ENST00000554040 ANKRD30BQ9BXX2 1392 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 MORN1Q5T089 497 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
ATXN3-224ENST00000554040 GPRASP1Q5JY77 1395 aa10.29□□□□□ -0.76
ATXN3-224ENST00000554040 FUT2Q10981 343 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms