RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 LINC00116Q8NCU8 138 aa23.58■■□□□ 1.37
SEC23A-206ENST00000553970 PANK3Q9H999 370 aa23.58■■□□□ 1.37
SEC23A-206ENST00000553970 ASAP1Q9ULH1 1129 aa23.58■■□□□ 1.37
SEC23A-206ENST00000553970 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
SEC23A-206ENST00000553970 ZNF831Q5JPB2 1677 aa23.55■■□□□ 1.36
SEC23A-206ENST00000553970 ATG3Q9NT62 314 aa23.55■■□□□ 1.36
SEC23A-206ENST00000553970 ADRA2BP18089 450 aa23.54■■□□□ 1.36
SEC23A-206ENST00000553970 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
SEC23A-206ENST00000553970 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
SEC23A-206ENST00000553970 ITPK1Q13572 414 aa23.53■■□□□ 1.36
SEC23A-206ENST00000553970 KNSTRNQ9Y448 316 aa23.53■■□□□ 1.36
SEC23A-206ENST00000553970 C1orf141Q5JVX7 400 aa23.52■■□□□ 1.36
SEC23A-206ENST00000553970 ZNF530Q6P9A1 599 aaPredicted RBP23.52■■□□□ 1.36
SEC23A-206ENST00000553970 AMIGO3Q86WK7 504 aa23.52■■□□□ 1.36
SEC23A-206ENST00000553970 KDRP35968 1356 aa23.52■■□□□ 1.36
SEC23A-206ENST00000553970 CABP4P57796 275 aa23.51■■□□□ 1.35
SEC23A-206ENST00000553970 TRAPPC3LQ5T215 181 aa23.51■■□□□ 1.35
SEC23A-206ENST00000553970 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
SEC23A-206ENST00000553970 NLGN1Q8N2Q7 840 aa23.5■■□□□ 1.35
SEC23A-206ENST00000553970 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
SEC23A-206ENST00000553970 RBM42Q9BTD8 480 aaKnown RBP23.5■■□□□ 1.35
SEC23A-206ENST00000553970 MTHFSP49914 203 aa23.49■■□□□ 1.35
SEC23A-206ENST00000553970 CNTNAP4Q9C0A0 1308 aa23.49■■□□□ 1.35
SEC23A-206ENST00000553970 ATP10DQ9P241 1426 aa23.49■■□□□ 1.35
SEC23A-206ENST00000553970 GPBP1L1Q9HC44 474 aaPredicted RBP23.48■■□□□ 1.35
SEC23A-206ENST00000553970 MMP10P09238 476 aa23.47■■□□□ 1.35
SEC23A-206ENST00000553970 RFC4P35249 363 aa23.45■■□□□ 1.34
SEC23A-206ENST00000553970 TGFB2P61812 414 aa23.45■■□□□ 1.34
SEC23A-206ENST00000553970 SMIM5Q71RC9 77 aa23.45■■□□□ 1.34
SEC23A-206ENST00000553970 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
SEC23A-206ENST00000553970 RPS6KA4O75676 772 aa23.44■■□□□ 1.34
SEC23A-206ENST00000553970 COL5A3P25940 1745 aaPredicted RBP23.44■■□□□ 1.34
SEC23A-206ENST00000553970 ADCY9O60503 1353 aa23.43■■□□□ 1.34
SEC23A-206ENST00000553970 SULT6B1Q6IMI4 303 aa23.43■■□□□ 1.34
SEC23A-206ENST00000553970 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
SEC23A-206ENST00000553970 KIF13BQ9NQT8 1826 aa23.41■■□□□ 1.34
SEC23A-206ENST00000553970 ARHGEF1Q92888 912 aaKnown RBP23.41■■□□□ 1.34
SEC23A-206ENST00000553970 SLC4A9Q96Q91 983 aa23.41■■□□□ 1.34
SEC23A-206ENST00000553970 PARP3Q9Y6F1 533 aa23.41■■□□□ 1.34
SEC23A-206ENST00000553970 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
SEC23A-206ENST00000553970 AEBP1Q8IUX7 1158 aa23.4■■□□□ 1.34
SEC23A-206ENST00000553970 IL13P35225 146 aa23.39■■□□□ 1.33
SEC23A-206ENST00000553970 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
SEC23A-206ENST00000553970 NFATC2IPQ8NCF5 419 aa23.39■■□□□ 1.33
SEC23A-206ENST00000553970 C10orf71Q711Q0 1435 aa23.39■■□□□ 1.33
SEC23A-206ENST00000553970 PXDNLA1KZ92 1463 aa23.38■■□□□ 1.33
SEC23A-206ENST00000553970 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
SEC23A-206ENST00000553970 GYS1P13807 737 aa23.38■■□□□ 1.33
SEC23A-206ENST00000553970 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
SEC23A-206ENST00000553970 CRKLP46109 303 aaKnown RBP23.36■■□□□ 1.33
SEC23A-206ENST00000553970 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
SEC23A-206ENST00000553970 CEP350Q5VT06 3117 aa23.35■■□□□ 1.33
SEC23A-206ENST00000553970 SCN11AQ9UI33 1791 aa23.35■■□□□ 1.33
SEC23A-206ENST00000553970 WWC3Q9ULE0 1092 aa23.35■■□□□ 1.33
SEC23A-206ENST00000553970 BCS1LQ9Y276 419 aa23.34■■□□□ 1.33
SEC23A-206ENST00000553970 MYH14Q7Z406 1995 aaKnown RBP23.33■■□□□ 1.33
SEC23A-206ENST00000553970 ZNF526Q8TF50 670 aaPredicted RBP23.33■■□□□ 1.33
SEC23A-206ENST00000553970 SLC52A2Q9HAB3 445 aa23.32■■□□□ 1.32
SEC23A-206ENST00000553970 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
SEC23A-206ENST00000553970 USP42Q9H9J4 1324 aaKnown RBP23.31■■□□□ 1.32
SEC23A-206ENST00000553970 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
SEC23A-206ENST00000553970 N4BP2Q86UW6 1770 aaPredicted RBP23.3■■□□□ 1.32
SEC23A-206ENST00000553970 A0A0G2JLW4 131 aa23.3■■□□□ 1.32
SEC23A-206ENST00000553970 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
SEC23A-206ENST00000553970 ZPR1O75312 459 aa23.29■■□□□ 1.32
SEC23A-206ENST00000553970 FCHSD2O94868 740 aa23.29■■□□□ 1.32
SEC23A-206ENST00000553970 TJP1Q07157 1748 aa23.29■■□□□ 1.32
SEC23A-206ENST00000553970 MRC1P22897 1456 aa23.29■■□□□ 1.32
SEC23A-206ENST00000553970 DPEP1P16444 411 aa23.28■■□□□ 1.32
SEC23A-206ENST00000553970 HSPA6P17066 643 aa23.28■■□□□ 1.32
SEC23A-206ENST00000553970 PIM2Q9P1W9 311 aa23.28■■□□□ 1.32
SEC23A-206ENST00000553970 ARHGAP27Q6ZUM4 889 aa23.27■■□□□ 1.32
SEC23A-206ENST00000553970 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
SEC23A-206ENST00000553970 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
SEC23A-206ENST00000553970 HMOX1P09601 288 aa23.25■■□□□ 1.31
SEC23A-206ENST00000553970 FKBP8Q14318 412 aa23.25■■□□□ 1.31
SEC23A-206ENST00000553970 INTS5Q6P9B9 1019 aaKnown RBP23.25■■□□□ 1.31
SEC23A-206ENST00000553970 BRCA1P38398 1863 aaKnown RBP23.25■■□□□ 1.31
SEC23A-206ENST00000553970 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
SEC23A-206ENST00000553970 DALRD3Q5D0E6 543 aaKnown RBP23.24■■□□□ 1.31
SEC23A-206ENST00000553970 SRP68Q9UHB9 627 aaKnown RBP23.24■■□□□ 1.31
SEC23A-206ENST00000553970 ARFGEF1Q9Y6D6 1849 aa23.24■■□□□ 1.31
SEC23A-206ENST00000553970 PER1O15534 1290 aaPredicted RBP23.23■■□□□ 1.31
SEC23A-206ENST00000553970 DNAJC10Q8IXB1 793 aa23.23■■□□□ 1.31
SEC23A-206ENST00000553970 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
SEC23A-206ENST00000553970 SOS1Q07889 1333 aaPredicted RBP23.23■■□□□ 1.31
SEC23A-206ENST00000553970 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
SEC23A-206ENST00000553970 TTC5Q8N0Z6 440 aa23.22■■□□□ 1.31
SEC23A-206ENST00000553970 KIF3CO14782 793 aa23.21■■□□□ 1.31
SEC23A-206ENST00000553970 CYP19A1P11511 503 aaPredicted RBP23.21■■□□□ 1.31
SEC23A-206ENST00000553970 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
SEC23A-206ENST00000553970 ADAMTS7Q9UKP4 1686 aa23.21■■□□□ 1.31
SEC23A-206ENST00000553970 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
SEC23A-206ENST00000553970 COL15A1P39059 1388 aa23.2■■□□□ 1.3
SEC23A-206ENST00000553970 POLRMTO00411 1230 aaKnown RBP23.2■■□□□ 1.3
SEC23A-206ENST00000553970 KCNA3P22001 575 aa23.2■■□□□ 1.3
SEC23A-206ENST00000553970 TM4SF1P30408 202 aa23.2■■□□□ 1.3
SEC23A-206ENST00000553970 DDR1Q08345 913 aa23.2■■□□□ 1.3
SEC23A-206ENST00000553970 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
SEC23A-206ENST00000553970 TOMM70O94826 608 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms