RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 TSPYL4Q9UJ04 414 aa13.99□□□□□ -0.17
PABPN1-203ENST00000553960 PAPPAQ13219 1627 aa13.98□□□□□ -0.17
PABPN1-203ENST00000553960 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
PABPN1-203ENST00000553960 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
PABPN1-203ENST00000553960 PTPRCP08575 1304 aa13.97□□□□□ -0.17
PABPN1-203ENST00000553960 ONECUT3O60422 494 aaPredicted RBP13.97□□□□□ -0.17
PABPN1-203ENST00000553960 BCAR3O75815 825 aa13.97□□□□□ -0.17
PABPN1-203ENST00000553960 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
PABPN1-203ENST00000553960 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
PABPN1-203ENST00000553960 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
PABPN1-203ENST00000553960 TSPYL6Q8N831 410 aa13.96□□□□□ -0.17
PABPN1-203ENST00000553960 CICQ96RK0 1608 aaPredicted RBP13.95□□□□□ -0.18
PABPN1-203ENST00000553960 HSPA1LP34931 641 aa13.95□□□□□ -0.18
PABPN1-203ENST00000553960 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
PABPN1-203ENST00000553960 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
PABPN1-203ENST00000553960 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
PABPN1-203ENST00000553960 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
PABPN1-203ENST00000553960 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
PABPN1-203ENST00000553960 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
PABPN1-203ENST00000553960 ZNF790Q6PG37 636 aa13.94□□□□□ -0.18
PABPN1-203ENST00000553960 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
PABPN1-203ENST00000553960 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
PABPN1-203ENST00000553960 ERBB4Q15303 1308 aa13.93□□□□□ -0.18
PABPN1-203ENST00000553960 GLI3P10071 1580 aa13.93□□□□□ -0.18
PABPN1-203ENST00000553960 ATRNO75882 1429 aa13.93□□□□□ -0.18
PABPN1-203ENST00000553960 EXOC5O00471 708 aa13.93□□□□□ -0.18
PABPN1-203ENST00000553960 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
PABPN1-203ENST00000553960 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
PABPN1-203ENST00000553960 ZNF831Q5JPB2 1677 aa13.93□□□□□ -0.18
PABPN1-203ENST00000553960 ABCC4O15439 1325 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 ADAMTS2O95450 1211 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 TRIM27P14373 513 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
PABPN1-203ENST00000553960 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 LAS1LQ9Y4W2 734 aaKnown RBP13.92□□□□□ -0.18
PABPN1-203ENST00000553960 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 PXDNLA1KZ92 1463 aa13.92□□□□□ -0.18
PABPN1-203ENST00000553960 RGS12O14924 1447 aa13.91□□□□□ -0.18
PABPN1-203ENST00000553960 ITGB4P16144 1822 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.18
PABPN1-203ENST00000553960 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 LAMB4A4D0S4 1761 aa13.9□□□□□ -0.18
PABPN1-203ENST00000553960 CABP4P57796 275 aa13.89□□□□□ -0.19
PABPN1-203ENST00000553960 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
PABPN1-203ENST00000553960 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
PABPN1-203ENST00000553960 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
PABPN1-203ENST00000553960 PLIN1O60240 522 aa13.88□□□□□ -0.19
PABPN1-203ENST00000553960 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
PABPN1-203ENST00000553960 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
PABPN1-203ENST00000553960 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
PABPN1-203ENST00000553960 STK31Q9BXU1 1019 aa13.88□□□□□ -0.19
PABPN1-203ENST00000553960 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
PABPN1-203ENST00000553960 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
PABPN1-203ENST00000553960 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
PABPN1-203ENST00000553960 NUTM2BA6NNL0 878 aaPredicted RBP13.87□□□□□ -0.19
PABPN1-203ENST00000553960 NUTM2EB1AL46 878 aaPredicted RBP13.87□□□□□ -0.19
PABPN1-203ENST00000553960 DDB1Q16531 1140 aa13.87□□□□□ -0.19
PABPN1-203ENST00000553960 NUTM2AQ8IVF1 878 aaPredicted RBP13.87□□□□□ -0.19
PABPN1-203ENST00000553960 EXOC6Q8TAG9 804 aa13.87□□□□□ -0.19
PABPN1-203ENST00000553960 RLBP1P12271 317 aa13.86□□□□□ -0.19
PABPN1-203ENST00000553960 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
PABPN1-203ENST00000553960 CRBNQ96SW2 442 aa13.86□□□□□ -0.19
PABPN1-203ENST00000553960 DDX21Q9NR30 783 aaKnown RBP eCLIP13.86□□□□□ -0.19
PABPN1-203ENST00000553960 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
PABPN1-203ENST00000553960 USP21Q9UK80 565 aa13.86□□□□□ -0.19
PABPN1-203ENST00000553960 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
PABPN1-203ENST00000553960 ATP10DQ9P241 1426 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
PABPN1-203ENST00000553960 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
PABPN1-203ENST00000553960 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
PABPN1-203ENST00000553960 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
PABPN1-203ENST00000553960 KCNQ3O43525 872 aa13.84□□□□□ -0.19
PABPN1-203ENST00000553960 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
PABPN1-203ENST00000553960 FTSJ3Q8IY81 847 aaKnown RBP13.84□□□□□ -0.19
PABPN1-203ENST00000553960 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
PABPN1-203ENST00000553960 C5P01031 1676 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 CCT4P50991 539 aaKnown RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 FLIIQ13045 1269 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 PDIA6Q15084 440 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 MARCH10Q8NA82 808 aaPredicted RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 PANK1Q8TE04 598 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
PABPN1-203ENST00000553960 BCL2L13Q9BXK5 485 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 KDM2BQ8NHM5 1336 aa13.83□□□□□ -0.2
PABPN1-203ENST00000553960 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
PABPN1-203ENST00000553960 FBXO41Q8TF61 875 aa13.82□□□□□ -0.2
PABPN1-203ENST00000553960 PIGBQ92521 554 aa13.82□□□□□ -0.2
PABPN1-203ENST00000553960 AFF2P51816 1311 aa13.82□□□□□ -0.2
PABPN1-203ENST00000553960 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms