RNA–Protein interactions for RNA: ENST00000553920.5

RBM23-211, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-211	ENST00000553920	IGSF1	Q8N6C5	1336 aa		11.25	□□□□□ -0.61
RBM23-211	ENST00000553920	KIAA1551	Q9HCM1	1747 aa		11.24	□□□□□ -0.61
RBM23-211	ENST00000553920	HMGB2	P26583	209 aa	Known RBP	11.24	□□□□□ -0.61
RBM23-211	ENST00000553920	ATP6V1A	P38606	617 aa		11.24	□□□□□ -0.61
RBM23-211	ENST00000553920	DAXX	Q9UER7	740 aa	Predicted RBP	11.24	□□□□□ -0.61
RBM23-211	ENST00000553920	KDR	P35968	1356 aa		11.24	□□□□□ -0.61
RBM23-211	ENST00000553920	GNPAT	O15228	680 aa		11.23	□□□□□ -0.61
RBM23-211	ENST00000553920	PPP4R3CP	Q6ZMV5	832 aa		11.23	□□□□□ -0.61
RBM23-211	ENST00000553920	TIMELESS	Q9UNS1	1208 aa		11.23	□□□□□ -0.61
RBM23-211	ENST00000553920	POLR3GL	Q9BT43	218 aa		11.22	□□□□□ -0.61
RBM23-211	ENST00000553920	KIF13B	Q9NQT8	1826 aa		11.22	□□□□□ -0.61
RBM23-211	ENST00000553920	COL5A3	P25940	1745 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM23-211	ENST00000553920	ZNF831	Q5JPB2	1677 aa		11.21	□□□□□ -0.61
RBM23-211	ENST00000553920	KDM6A	O15550	1401 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM23-211	ENST00000553920	ZNF526	Q8TF50	670 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM23-211	ENST00000553920	PANK3	Q9H999	370 aa		11.21	□□□□□ -0.61
RBM23-211	ENST00000553920	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.21	□□□□□ -0.62
RBM23-211	ENST00000553920	PXDNL	A1KZ92	1463 aa		11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	MYH14	Q7Z406	1995 aa	Known RBP	11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	ERVV-2	B6SEH9	535 aa		11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	MMP10	P09238	476 aa		11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	CIC	Q96RK0	1608 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM23-211	ENST00000553920	PLEKHG2	Q9H7P9	1386 aa		11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	HSPA5	P11021	654 aa	Known RBP	11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	TRAPPC3L	Q5T215	181 aa		11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	AEBP1	Q8IUX7	1158 aa		11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	ARHGEF1	Q92888	912 aa	Known RBP	11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	DCAF5	Q96JK2	942 aa		11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	RBM42	Q9BTD8	480 aa	Known RBP	11.19	□□□□□ -0.62
RBM23-211	ENST00000553920	C4A	P0C0L4	1744 aa		11.18	□□□□□ -0.62
RBM23-211	ENST00000553920	GYS1	P13807	737 aa		11.18	□□□□□ -0.62
RBM23-211	ENST00000553920	RC3H1	Q5TC82	1133 aa	Known RBP	11.18	□□□□□ -0.62
RBM23-211	ENST00000553920	RTCB	Q9Y3I0	505 aa	Known RBP	11.18	□□□□□ -0.62
RBM23-211	ENST00000553920	C10orf71	Q711Q0	1435 aa		11.18	□□□□□ -0.62
RBM23-211	ENST00000553920	CNTNAP4	Q9C0A0	1308 aa		11.17	□□□□□ -0.62
RBM23-211	ENST00000553920		A0A0G2JLW4	131 aa		11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	KIF3C	O14782	793 aa		11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	RPS6KA4	O75676	772 aa		11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	PCGF6	Q9BYE7	350 aa		11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	BRCA1	P38398	1863 aa	Known RBP	11.17	□□□□□ -0.62
RBM23-211	ENST00000553920	CLSPN	Q9HAW4	1339 aa		11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	TJP1	Q07157	1748 aa		11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	KCNA3	P22001	575 aa		11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	CABP4	P57796	275 aa		11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	NLGN1	Q8N2Q7	840 aa		11.16	□□□□□ -0.62
RBM23-211	ENST00000553920	ADAMTS7	Q9UKP4	1686 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	PTCD1	O75127	700 aa	Known RBP	11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	HSP90AB1	P08238	724 aa	Known RBP	11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	DPEP1	P16444	411 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	HSPA6	P17066	643 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	IL13	P35225	146 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	TGFB2	P61812	414 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	AMOT	Q4VCS5	1084 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	NFATC2IP	Q8NCF5	419 aa		11.15	□□□□□ -0.62
RBM23-211	ENST00000553920	SCN11A	Q9UI33	1791 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	RFC4	P35249	363 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	MTHFS	P49914	203 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	SULT6B1	Q6IMI4	303 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	MORC1	Q86VD1	984 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	SRP68	Q9UHB9	627 aa	Known RBP	11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	BCS1L	Q9Y276	419 aa		11.14	□□□□□ -0.63
RBM23-211	ENST00000553920	CRKL	P46109	303 aa	Known RBP	11.13	□□□□□ -0.63
RBM23-211	ENST00000553920	FKBP8	Q14318	412 aa		11.13	□□□□□ -0.63
RBM23-211	ENST00000553920	INTS5	Q6P9B9	1019 aa	Known RBP	11.13	□□□□□ -0.63
RBM23-211	ENST00000553920	DDR1	Q08345	913 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	IFFO2	Q5TF58	517 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	LGR6	Q9HBX8	967 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	CCDC87	Q9NVE4	849 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	PARP3	Q9Y6F1	533 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	ARFGEF1	Q9Y6D6	1849 aa		11.12	□□□□□ -0.63
RBM23-211	ENST00000553920	USP42	Q9H9J4	1324 aa	Known RBP	11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	FCHSD2	O94868	740 aa		11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	C1orf141	Q5JVX7	400 aa		11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	ARHGAP27	Q6ZUM4	889 aa		11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	VIRMA	Q69YN4	1812 aa	Known RBP	11.11	□□□□□ -0.63
RBM23-211	ENST00000553920	TM4SF1	P30408	202 aa		11.1	□□□□□ -0.63
RBM23-211	ENST00000553920	DNAJC10	Q8IXB1	793 aa		11.1	□□□□□ -0.63
RBM23-211	ENST00000553920	NMRK2	Q9NPI5	230 aa		11.1	□□□□□ -0.63
RBM23-211	ENST00000553920	POLRMT	O00411	1230 aa	Known RBP	11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	CHRNA5	P30532	468 aa		11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	SLC39A6	Q13433	755 aa		11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	AKAP4	Q5JQC9	854 aa		11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	KCP	Q6ZWJ8	1503 aa		11.09	□□□□□ -0.63
RBM23-211	ENST00000553920	MRC1	P22897	1456 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	AFDN	P55196	1824 aa	Known RBP	11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	RNMT	O43148	476 aa	Known RBP	11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	TOMM70	O94826	608 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	HMOX1	P09601	288 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	C9orf131	Q5VYM1	1079 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	USPL1	Q5W0Q7	1092 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	DNAJC5G	Q8N7S2	189 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	SLC52A2	Q9HAB3	445 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	PIM2	Q9P1W9	311 aa		11.08	□□□□□ -0.64
RBM23-211	ENST00000553920	KNSTRN	Q9Y448	316 aa		11.08	□□□□□ -0.64

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