RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
ACTN1-210ENST00000553779 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
ACTN1-210ENST00000553779 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
ACTN1-210ENST00000553779 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
ACTN1-210ENST00000553779 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
ACTN1-210ENST00000553779 ZNF831Q5JPB2 1677 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 C4AP0C0L4 1744 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
ACTN1-210ENST00000553779 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-210ENST00000553779 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 PANK3Q9H999 370 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
ACTN1-210ENST00000553779 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
ACTN1-210ENST00000553779 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
ACTN1-210ENST00000553779 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-210ENST00000553779 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
ACTN1-210ENST00000553779 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-210ENST00000553779 CEP350Q5VT06 3117 aa13.52□□□□□ -0.24
ACTN1-210ENST00000553779 CABP4P57796 275 aa13.52□□□□□ -0.25
ACTN1-210ENST00000553779 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-210ENST00000553779 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
ACTN1-210ENST00000553779 KNSTRNQ9Y448 316 aa13.52□□□□□ -0.25
ACTN1-210ENST00000553779 ERVV-2B6SEH9 535 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 ITPK1Q13572 414 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
ACTN1-210ENST00000553779 MMP10P09238 476 aa13.5□□□□□ -0.25
ACTN1-210ENST00000553779 TRAPPC3LQ5T215 181 aa13.5□□□□□ -0.25
ACTN1-210ENST00000553779 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
ACTN1-210ENST00000553779 RFC4P35249 363 aa13.49□□□□□ -0.25
ACTN1-210ENST00000553779 MTHFSP49914 203 aa13.49□□□□□ -0.25
ACTN1-210ENST00000553779 ARFGEF1Q9Y6D6 1849 aa13.48□□□□□ -0.25
ACTN1-210ENST00000553779 KDRP35968 1356 aa13.48□□□□□ -0.25
ACTN1-210ENST00000553779 TJP1Q07157 1748 aa13.48□□□□□ -0.25
ACTN1-210ENST00000553779 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-210ENST00000553779 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
ACTN1-210ENST00000553779 ADRA2BP18089 450 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
ACTN1-210ENST00000553779 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
ACTN1-210ENST00000553779 AEBP1Q8IUX7 1158 aa13.46□□□□□ -0.25
ACTN1-210ENST00000553779 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
ACTN1-210ENST00000553779 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
ACTN1-210ENST00000553779 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
ACTN1-210ENST00000553779 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
ACTN1-210ENST00000553779 ADCY9O60503 1353 aa13.44□□□□□ -0.26
ACTN1-210ENST00000553779 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
ACTN1-210ENST00000553779 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
ACTN1-210ENST00000553779 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
ACTN1-210ENST00000553779 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 FCHSD2O94868 740 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
ACTN1-210ENST00000553779 TGFB2P61812 414 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-210ENST00000553779 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
ACTN1-210ENST00000553779 ZPR1O75312 459 aa13.41□□□□□ -0.26
ACTN1-210ENST00000553779 GYS1P13807 737 aa13.41□□□□□ -0.26
ACTN1-210ENST00000553779 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
ACTN1-210ENST00000553779 HMOX1P09601 288 aa13.4□□□□□ -0.26
ACTN1-210ENST00000553779 AKAP4Q5JQC9 854 aa13.4□□□□□ -0.26
ACTN1-210ENST00000553779 SBF1O95248 1867 aa13.4□□□□□ -0.26
ACTN1-210ENST00000553779 DPEP1P16444 411 aa13.39□□□□□ -0.27
ACTN1-210ENST00000553779 IL13P35225 146 aa13.39□□□□□ -0.27
ACTN1-210ENST00000553779 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
ACTN1-210ENST00000553779 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
ACTN1-210ENST00000553779 UBR2Q8IWV8 1755 aa13.39□□□□□ -0.27
ACTN1-210ENST00000553779 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
ACTN1-210ENST00000553779 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
ACTN1-210ENST00000553779 SLC52A2Q9HAB3 445 aa13.38□□□□□ -0.27
ACTN1-210ENST00000553779 USP42Q9H9J4 1324 aaKnown RBP13.38□□□□□ -0.27
ACTN1-210ENST00000553779 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
ACTN1-210ENST00000553779 MRC1P22897 1456 aa13.37□□□□□ -0.27
ACTN1-210ENST00000553779 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
ACTN1-210ENST00000553779 HSPA6P17066 643 aa13.37□□□□□ -0.27
ACTN1-210ENST00000553779 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-210ENST00000553779 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
ACTN1-210ENST00000553779 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
ACTN1-210ENST00000553779 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
ACTN1-210ENST00000553779 FKBP8Q14318 412 aa13.36□□□□□ -0.27
ACTN1-210ENST00000553779 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
ACTN1-210ENST00000553779 AMER1Q5JTC6 1135 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-210ENST00000553779 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
ACTN1-210ENST00000553779 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
ACTN1-210ENST00000553779 COL15A1P39059 1388 aa13.35□□□□□ -0.27
ACTN1-210ENST00000553779 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
ACTN1-210ENST00000553779 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
ACTN1-210ENST00000553779 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
ACTN1-210ENST00000553779 SIPA1L3O60292 1781 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-210ENST00000553779 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
ACTN1-210ENST00000553779 USPL1Q5W0Q7 1092 aa13.34□□□□□ -0.27
ACTN1-210ENST00000553779 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms