RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 ACIN1Q9UKV3 1341 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-205ENST00000553691 PNPLA6Q8IY17 1366 aa9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 IL21Q9HBE4 155 aa9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 CEP350Q5VT06 3117 aa9.51□□□□□ -0.89
VIPAS39-205ENST00000553691 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 A0A0G2JS52 829 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 ZMYND10O75800 440 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 RGL3Q3MIN7 710 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 CHD4Q14839 1912 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
VIPAS39-205ENST00000553691 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
VIPAS39-205ENST00000553691 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
VIPAS39-205ENST00000553691 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-205ENST00000553691 CDC42BPGQ6DT37 1551 aa9.49□□□□□ -0.89
VIPAS39-205ENST00000553691 LRPPRCP42704 1394 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-205ENST00000553691 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 DDX17Q92841 729 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 DHX57Q6P158 1386 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 ABCC11Q96J66 1382 aa9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 PLEKHH1Q9ULM0 1364 aa9.48□□□□□ -0.89
VIPAS39-205ENST00000553691 C1orf167Q5SNV9 1468 aa9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 TRIM26Q12899 539 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 PRR14Q9BWN1 585 aa9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 ATRNO75882 1429 aa9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-205ENST00000553691 TLL1O43897 1013 aa9.46□□□□□ -0.9
VIPAS39-205ENST00000553691 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
VIPAS39-205ENST00000553691 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
VIPAS39-205ENST00000553691 BAG6P46379 1132 aa9.45□□□□□ -0.9
VIPAS39-205ENST00000553691 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
VIPAS39-205ENST00000553691 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
VIPAS39-205ENST00000553691 ZPR1O75312 459 aa9.44□□□□□ -0.9
VIPAS39-205ENST00000553691 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
VIPAS39-205ENST00000553691 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
VIPAS39-205ENST00000553691 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-205ENST00000553691 ADGRB2O60241 1585 aa9.43□□□□□ -0.9
VIPAS39-205ENST00000553691 FUT2Q10981 343 aa9.43□□□□□ -0.9
VIPAS39-205ENST00000553691 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
VIPAS39-205ENST00000553691 REPIN1Q9BWE0 567 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-205ENST00000553691 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
VIPAS39-205ENST00000553691 USP32Q8NFA0 1604 aa9.42□□□□□ -0.9
VIPAS39-205ENST00000553691 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
VIPAS39-205ENST00000553691 RGPD8O14715 1765 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-205ENST00000553691 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-205ENST00000553691 PXDNQ92626 1479 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 GCGRP47871 477 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 MYT1Q01538 1121 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 ORAI2Q96SN7 254 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 STK26Q9P289 416 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 KIAA1210Q9ULL0 1709 aa9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 COL22A1Q8NFW1 1626 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-205ENST00000553691 SOS2Q07890 1332 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 CD46P15529 392 aa9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 R3HDM1Q15032 1099 aaKnown RBP9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
VIPAS39-205ENST00000553691 CLCN1P35523 988 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
VIPAS39-205ENST00000553691 GLI3P10071 1580 aa9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 NR1I2O75469 434 aa9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 SCUBE3Q8IX30 993 aa9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 ZNF784Q8NCA9 323 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 UTRNP46939 3433 aa9.38□□□□□ -0.91
VIPAS39-205ENST00000553691 TNS1Q9HBL0 1735 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-205ENST00000553691 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
VIPAS39-205ENST00000553691 HLA-CQ95604 372 aa9.37□□□□□ -0.91
VIPAS39-205ENST00000553691 PRAM1Q96QH2 718 aa9.37□□□□□ -0.91
VIPAS39-205ENST00000553691 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
VIPAS39-205ENST00000553691 NPHP3Q7Z494 1330 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 TRIM66O15016 1216 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 ZEB1P37275 1124 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 MORN1Q5T089 497 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 AK7Q96M32 723 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-205ENST00000553691 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
VIPAS39-205ENST00000553691 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-205ENST00000553691 S1PR4O95977 384 aa9.35□□□□□ -0.91
VIPAS39-205ENST00000553691 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms