RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
PTPN21-203ENST00000553531 SIK1P57059 783 aa16.12■□□□□ 0.17
PTPN21-203ENST00000553531 ITPK1Q13572 414 aa16.12■□□□□ 0.17
PTPN21-203ENST00000553531 AKAP4Q5JQC9 854 aa16.12■□□□□ 0.17
PTPN21-203ENST00000553531 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
PTPN21-203ENST00000553531 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
PTPN21-203ENST00000553531 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
PTPN21-203ENST00000553531 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
PTPN21-203ENST00000553531 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
PTPN21-203ENST00000553531 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
PTPN21-203ENST00000553531 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
PTPN21-203ENST00000553531 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
PTPN21-203ENST00000553531 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-203ENST00000553531 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
PTPN21-203ENST00000553531 TFCP2L1Q9NZI6 479 aa16.1■□□□□ 0.17
PTPN21-203ENST00000553531 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
PTPN21-203ENST00000553531 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
PTPN21-203ENST00000553531 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
PTPN21-203ENST00000553531 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
PTPN21-203ENST00000553531 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
PTPN21-203ENST00000553531 CABP4P57796 275 aa16.08■□□□□ 0.16
PTPN21-203ENST00000553531 SMIM5Q71RC9 77 aa16.08■□□□□ 0.16
PTPN21-203ENST00000553531 CFAP53Q96M91 514 aa16.08■□□□□ 0.16
PTPN21-203ENST00000553531 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
PTPN21-203ENST00000553531 C4AP0C0L4 1744 aa16.07■□□□□ 0.16
PTPN21-203ENST00000553531 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
PTPN21-203ENST00000553531 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
PTPN21-203ENST00000553531 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
PTPN21-203ENST00000553531 SLC16A10Q8TF71 515 aa16.06■□□□□ 0.16
PTPN21-203ENST00000553531 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
PTPN21-203ENST00000553531 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
PTPN21-203ENST00000553531 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
PTPN21-203ENST00000553531 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
PTPN21-203ENST00000553531 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-203ENST00000553531 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTPN21-203ENST00000553531 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
PTPN21-203ENST00000553531 PPP1R1BQ9UD71 204 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-203ENST00000553531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.02■□□□□ 0.16
PTPN21-203ENST00000553531 FCHSD2O94868 740 aa16.02■□□□□ 0.16
PTPN21-203ENST00000553531 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
PTPN21-203ENST00000553531 AK7Q96M32 723 aa16.02■□□□□ 0.16
PTPN21-203ENST00000553531 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
PTPN21-203ENST00000553531 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
PTPN21-203ENST00000553531 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
PTPN21-203ENST00000553531 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
PTPN21-203ENST00000553531 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-203ENST00000553531 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
PTPN21-203ENST00000553531 RALBP1Q15311 655 aa16.01■□□□□ 0.15
PTPN21-203ENST00000553531 ARXQ96QS3 562 aa16.01■□□□□ 0.15
PTPN21-203ENST00000553531 FHDC1Q9C0D6 1143 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-203ENST00000553531 GNPATO15228 680 aa16■□□□□ 0.15
PTPN21-203ENST00000553531 SSFA2P28290 1259 aa16■□□□□ 0.15
PTPN21-203ENST00000553531 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
PTPN21-203ENST00000553531 SYT17Q9BSW7 474 aa16■□□□□ 0.15
PTPN21-203ENST00000553531 PHF14O94880 888 aa15.99■□□□□ 0.15
PTPN21-203ENST00000553531 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
PTPN21-203ENST00000553531 RC3H1Q5TC82 1133 aaKnown RBP15.99■□□□□ 0.15
PTPN21-203ENST00000553531 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
PTPN21-203ENST00000553531 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
PTPN21-203ENST00000553531 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
PTPN21-203ENST00000553531 MSH5O43196 834 aa15.97■□□□□ 0.15
PTPN21-203ENST00000553531 CRKLP46109 303 aaKnown RBP15.97■□□□□ 0.15
PTPN21-203ENST00000553531 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
PTPN21-203ENST00000553531 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
PTPN21-203ENST00000553531 RPS6KA4O75676 772 aa15.96■□□□□ 0.15
PTPN21-203ENST00000553531 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
PTPN21-203ENST00000553531 KIAA1551Q9HCM1 1747 aa15.96■□□□□ 0.15
PTPN21-203ENST00000553531 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.14
PTPN21-203ENST00000553531 CYP19A1P11511 503 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-203ENST00000553531 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-203ENST00000553531 KCNQ3O43525 872 aa15.94■□□□□ 0.14
PTPN21-203ENST00000553531 POLD1P28340 1107 aa15.94■□□□□ 0.14
PTPN21-203ENST00000553531 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
PTPN21-203ENST00000553531 MCM10Q7L590 875 aa15.94■□□□□ 0.14
PTPN21-203ENST00000553531 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
PTPN21-203ENST00000553531 ZNF496Q96IT1 587 aaPredicted RBP15.94■□□□□ 0.14
PTPN21-203ENST00000553531 RTCBQ9Y3I0 505 aaKnown RBP15.94■□□□□ 0.14
PTPN21-203ENST00000553531 TEFQ10587 303 aa15.93■□□□□ 0.14
PTPN21-203ENST00000553531 ZNF790Q6PG37 636 aa15.93■□□□□ 0.14
PTPN21-203ENST00000553531 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
PTPN21-203ENST00000553531 HEG1Q9ULI3 1381 aa15.92■□□□□ 0.14
PTPN21-203ENST00000553531 NLGN2Q8NFZ4 835 aa15.92■□□□□ 0.14
PTPN21-203ENST00000553531 SOS1Q07889 1333 aaPredicted RBP15.92■□□□□ 0.14
PTPN21-203ENST00000553531 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
PTPN21-203ENST00000553531 GYS1P13807 737 aa15.91■□□□□ 0.14
PTPN21-203ENST00000553531 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
PTPN21-203ENST00000553531 CCDC87Q9NVE4 849 aa15.91■□□□□ 0.14
PTPN21-203ENST00000553531 ZBTB1Q9Y2K1 713 aa15.9■□□□□ 0.14
PTPN21-203ENST00000553531 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
PTPN21-203ENST00000553531 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
PTPN21-203ENST00000553531 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
PTPN21-203ENST00000553531 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
PTPN21-203ENST00000553531 USP42Q9H9J4 1324 aaKnown RBP15.89■□□□□ 0.13
PTPN21-203ENST00000553531 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
PTPN21-203ENST00000553531 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
PTPN21-203ENST00000553531 COL15A1P39059 1388 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
PTPN21-203ENST00000553531 BRCA1P38398 1863 aaKnown RBP15.87■□□□□ 0.13
PTPN21-203ENST00000553531 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms