RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 PHKA2P46019 1235 aa13.44□□□□□ -0.26
PCNX1-205ENST00000553508 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
PCNX1-205ENST00000553508 ZNF594Q96JF6 807 aaPredicted RBP13.44□□□□□ -0.26
PCNX1-205ENST00000553508 DNAAF2Q9NVR5 837 aaKnown RBP13.44□□□□□ -0.26
PCNX1-205ENST00000553508 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
PCNX1-205ENST00000553508 H3BM21 787 aa13.43□□□□□ -0.26
PCNX1-205ENST00000553508 TPCN2Q8NHX9 752 aa13.43□□□□□ -0.26
PCNX1-205ENST00000553508 FHDC1Q9C0D6 1143 aaPredicted RBP13.43□□□□□ -0.26
PCNX1-205ENST00000553508 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
PCNX1-205ENST00000553508 RASA1P20936 1047 aa13.42□□□□□ -0.26
PCNX1-205ENST00000553508 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
PCNX1-205ENST00000553508 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
PCNX1-205ENST00000553508 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
PCNX1-205ENST00000553508 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
PCNX1-205ENST00000553508 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
PCNX1-205ENST00000553508 TAS1R3Q7RTX0 852 aa13.41□□□□□ -0.26
PCNX1-205ENST00000553508 NPAS3Q8IXF0 933 aa13.41□□□□□ -0.26
PCNX1-205ENST00000553508 ZNF358Q9NW07 568 aa13.41□□□□□ -0.26
PCNX1-205ENST00000553508 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
PCNX1-205ENST00000553508 SMTNP53814 917 aa13.4□□□□□ -0.26
PCNX1-205ENST00000553508 GAS2L1Q99501 681 aaPredicted RBP13.4□□□□□ -0.26
PCNX1-205ENST00000553508 SPATA31C2B4DYI2 1134 aa13.39□□□□□ -0.27
PCNX1-205ENST00000553508 GNASQ5JWF2 1037 aa13.39□□□□□ -0.27
PCNX1-205ENST00000553508 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
PCNX1-205ENST00000553508 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
PCNX1-205ENST00000553508 TIMMDC1Q9NPL8 285 aa13.38□□□□□ -0.27
PCNX1-205ENST00000553508 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
PCNX1-205ENST00000553508 A6NJY4 79 aa13.37□□□□□ -0.27
PCNX1-205ENST00000553508 BACH1O14867 736 aa13.37□□□□□ -0.27
PCNX1-205ENST00000553508 C4orf17Q53FE4 359 aa13.37□□□□□ -0.27
PCNX1-205ENST00000553508 LCE2CQ5TA81 110 aa13.37□□□□□ -0.27
PCNX1-205ENST00000553508 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
PCNX1-205ENST00000553508 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
PCNX1-205ENST00000553508 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
PCNX1-205ENST00000553508 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
PCNX1-205ENST00000553508 CDC14CA4D256 554 aa13.36□□□□□ -0.27
PCNX1-205ENST00000553508 ITGA6P23229 1130 aa13.36□□□□□ -0.27
PCNX1-205ENST00000553508 RIPOR1Q6ZS17 1223 aa13.36□□□□□ -0.27
PCNX1-205ENST00000553508 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
PCNX1-205ENST00000553508 IRF7Q92985 503 aa13.36□□□□□ -0.27
PCNX1-205ENST00000553508 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
PCNX1-205ENST00000553508 SFI1A8K8P3 1242 aa13.35□□□□□ -0.27
PCNX1-205ENST00000553508 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
PCNX1-205ENST00000553508 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
PCNX1-205ENST00000553508 RHBDD1Q8TEB9 315 aa13.35□□□□□ -0.27
PCNX1-205ENST00000553508 LCE2AQ5TA79 106 aaPredicted RBP13.34□□□□□ -0.27
PCNX1-205ENST00000553508 USP3Q9Y6I4 520 aa13.34□□□□□ -0.27
PCNX1-205ENST00000553508 PLA2G4AP47712 749 aa13.33□□□□□ -0.28
PCNX1-205ENST00000553508 TBCELQ5QJ74 424 aa13.33□□□□□ -0.28
PCNX1-205ENST00000553508 VWA5B2Q8N398 1253 aa13.33□□□□□ -0.28
PCNX1-205ENST00000553508 CUEDC1Q9NWM3 386 aaPredicted RBP13.33□□□□□ -0.28
PCNX1-205ENST00000553508 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
PCNX1-205ENST00000553508 DYRK1BQ9Y463 629 aa13.33□□□□□ -0.28
PCNX1-205ENST00000553508 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
PCNX1-205ENST00000553508 GPAMQ9HCL2 828 aa13.32□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L21D6R901 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 MTFR1Q15390 333 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 SIX5Q8N196 739 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 SERPINA10Q9UK55 444 aa13.31□□□□□ -0.28
PCNX1-205ENST00000553508 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
PCNX1-205ENST00000553508 GMPRP36959 345 aa13.3□□□□□ -0.28
PCNX1-205ENST00000553508 DPYDQ12882 1025 aa13.3□□□□□ -0.28
PCNX1-205ENST00000553508 PTK7Q13308 1070 aa13.3□□□□□ -0.28
PCNX1-205ENST00000553508 TSEN2Q8NCE0 465 aaKnown RBP13.3□□□□□ -0.28
PCNX1-205ENST00000553508 AIDAQ96BJ3 306 aa13.3□□□□□ -0.28
PCNX1-205ENST00000553508 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
PCNX1-205ENST00000553508 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.29□□□□□ -0.28
PCNX1-205ENST00000553508 LGR5O75473 907 aa13.29□□□□□ -0.28
PCNX1-205ENST00000553508 DKK1O94907 266 aa13.29□□□□□ -0.28
PCNX1-205ENST00000553508 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
PCNX1-205ENST00000553508 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
PCNX1-205ENST00000553508 GPR161Q8N6U8 529 aaKnown RBP13.29□□□□□ -0.28
PCNX1-205ENST00000553508 SCHIP1Q9P0W5 487 aaPredicted RBP13.29□□□□□ -0.28
PCNX1-205ENST00000553508 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
PCNX1-205ENST00000553508 PARP3Q9Y6F1 533 aa13.29□□□□□ -0.28
PCNX1-205ENST00000553508 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
PCNX1-205ENST00000553508 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
PCNX1-205ENST00000553508 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
PCNX1-205ENST00000553508 F11P03951 625 aa13.27□□□□□ -0.29
PCNX1-205ENST00000553508 SEC13P55735 322 aa13.27□□□□□ -0.29
PCNX1-205ENST00000553508 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
PCNX1-205ENST00000553508 SLC9A9Q8IVB4 645 aa13.27□□□□□ -0.29
PCNX1-205ENST00000553508 HINFPQ9BQA5 517 aa13.27□□□□□ -0.29
PCNX1-205ENST00000553508 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
PCNX1-205ENST00000553508 MSX1P28360 303 aa13.26□□□□□ -0.29
PCNX1-205ENST00000553508 EPHA4P54764 986 aa13.26□□□□□ -0.29
PCNX1-205ENST00000553508 DBN1Q16643 649 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms