RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
NPC2-204ENST00000553490 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
NPC2-204ENST00000553490 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
NPC2-204ENST00000553490 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
NPC2-204ENST00000553490 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
NPC2-204ENST00000553490 KDRP35968 1356 aa11.89□□□□□ -0.51
NPC2-204ENST00000553490 ZNF831Q5JPB2 1677 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 TGFB2P61812 414 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
NPC2-204ENST00000553490 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
NPC2-204ENST00000553490 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
NPC2-204ENST00000553490 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 FCHSD2O94868 740 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 HTRA3P83110 453 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
NPC2-204ENST00000553490 CAPN15O75808 1086 aa11.86□□□□□ -0.51
NPC2-204ENST00000553490 DPEP1P16444 411 aa11.86□□□□□ -0.51
NPC2-204ENST00000553490 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
NPC2-204ENST00000553490 C9orf131Q5VYM1 1079 aa11.86□□□□□ -0.51
NPC2-204ENST00000553490 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
NPC2-204ENST00000553490 PCNTO95613 3336 aa11.86□□□□□ -0.51
NPC2-204ENST00000553490 TMF1P82094 1093 aa11.85□□□□□ -0.51
NPC2-204ENST00000553490 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
NPC2-204ENST00000553490 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
NPC2-204ENST00000553490 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
NPC2-204ENST00000553490 PHKG2P15735 406 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 ADRA2BP18089 450 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 FSTL1Q12841 308 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 IFNL2Q8IZJ0 200 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
NPC2-204ENST00000553490 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 KDM2BQ8NHM5 1336 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
NPC2-204ENST00000553490 GYS1P13807 737 aa11.83□□□□□ -0.52
NPC2-204ENST00000553490 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
NPC2-204ENST00000553490 RNF181Q9P0P0 153 aa11.83□□□□□ -0.52
NPC2-204ENST00000553490 RFC4P35249 363 aa11.82□□□□□ -0.52
NPC2-204ENST00000553490 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
NPC2-204ENST00000553490 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
NPC2-204ENST00000553490 TIAM2Q8IVF5 1701 aa11.81□□□□□ -0.52
NPC2-204ENST00000553490 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
NPC2-204ENST00000553490 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
NPC2-204ENST00000553490 EYA1Q99502 592 aa11.81□□□□□ -0.52
NPC2-204ENST00000553490 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
NPC2-204ENST00000553490 WASHC2AQ641Q2 1341 aa11.81□□□□□ -0.52
NPC2-204ENST00000553490 TJP1Q07157 1748 aa11.8□□□□□ -0.52
NPC2-204ENST00000553490 KCNA3P22001 575 aa11.8□□□□□ -0.52
NPC2-204ENST00000553490 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
NPC2-204ENST00000553490 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
NPC2-204ENST00000553490 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
NPC2-204ENST00000553490 SBF1O95248 1867 aa11.8□□□□□ -0.52
NPC2-204ENST00000553490 KDM6AO15550 1401 aaPredicted RBP11.79□□□□□ -0.52
NPC2-204ENST00000553490 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 PRELPP51888 382 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 SMC1BQ8NDV3 1235 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
NPC2-204ENST00000553490 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
NPC2-204ENST00000553490 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
NPC2-204ENST00000553490 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
NPC2-204ENST00000553490 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
NPC2-204ENST00000553490 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
NPC2-204ENST00000553490 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
NPC2-204ENST00000553490 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
NPC2-204ENST00000553490 CHRNA5P30532 468 aa11.77□□□□□ -0.53
NPC2-204ENST00000553490 RASSF7Q02833 373 aa11.77□□□□□ -0.53
NPC2-204ENST00000553490 DDR1Q08345 913 aa11.77□□□□□ -0.53
NPC2-204ENST00000553490 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
NPC2-204ENST00000553490 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
NPC2-204ENST00000553490 ADAMTS7Q9UKP4 1686 aa11.77□□□□□ -0.53
NPC2-204ENST00000553490 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
NPC2-204ENST00000553490 FKBP8Q14318 412 aa11.76□□□□□ -0.53
NPC2-204ENST00000553490 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
NPC2-204ENST00000553490 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
NPC2-204ENST00000553490 CABP4P57796 275 aa11.75□□□□□ -0.53
NPC2-204ENST00000553490 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
NPC2-204ENST00000553490 PCGF6Q9BYE7 350 aa11.75□□□□□ -0.53
NPC2-204ENST00000553490 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
NPC2-204ENST00000553490 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
NPC2-204ENST00000553490 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
NPC2-204ENST00000553490 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
NPC2-204ENST00000553490 LMNB1P20700 586 aa11.72□□□□□ -0.53
NPC2-204ENST00000553490 TNNT2P45379 298 aaPredicted RBP11.72□□□□□ -0.53
NPC2-204ENST00000553490 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
NPC2-204ENST00000553490 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
NPC2-204ENST00000553490 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
NPC2-204ENST00000553490 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
NPC2-204ENST00000553490 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
NPC2-204ENST00000553490 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
NPC2-204ENST00000553490 ZPR1O75312 459 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms