RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 PALLDQ8WX93 1383 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
RDH11-203ENST00000553384 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
RDH11-203ENST00000553384 NBPF6Q5VWK0 638 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 NBPF4Q96M43 638 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 PCDH11XQ9BZA7 1347 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 PCDH11YQ9BZA8 1340 aa9.59□□□□□ -0.87
RDH11-203ENST00000553384 TOMM70O94826 608 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
RDH11-203ENST00000553384 SSFA2P28290 1259 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
RDH11-203ENST00000553384 DNAJC5GQ8N7S2 189 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 AK7Q96M32 723 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 INSRP06213 1382 aa9.58□□□□□ -0.88
RDH11-203ENST00000553384 MAP2P11137 1827 aaKnown RBP9.58□□□□□ -0.88
RDH11-203ENST00000553384 C5P01031 1676 aa9.57□□□□□ -0.88
RDH11-203ENST00000553384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.56□□□□□ -0.88
RDH11-203ENST00000553384 MPRIPQ6WCQ1 1025 aa9.56□□□□□ -0.88
RDH11-203ENST00000553384 TGFB2P61812 414 aa9.56□□□□□ -0.88
RDH11-203ENST00000553384 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
RDH11-203ENST00000553384 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
RDH11-203ENST00000553384 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
RDH11-203ENST00000553384 NUDCQ9Y266 331 aa9.56□□□□□ -0.88
RDH11-203ENST00000553384 CICQ96RK0 1608 aaPredicted RBP9.56□□□□□ -0.88
RDH11-203ENST00000553384 CYP27B1O15528 508 aa9.55□□□□□ -0.88
RDH11-203ENST00000553384 TAF1LQ8IZX4 1826 aa9.55□□□□□ -0.88
RDH11-203ENST00000553384 C4BP0C0L5 1744 aa9.55□□□□□ -0.88
RDH11-203ENST00000553384 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
RDH11-203ENST00000553384 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
RDH11-203ENST00000553384 SIK1P57059 783 aa9.54□□□□□ -0.88
RDH11-203ENST00000553384 AMIGO3Q86WK7 504 aa9.54□□□□□ -0.88
RDH11-203ENST00000553384 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
RDH11-203ENST00000553384 PIGBQ92521 554 aa9.54□□□□□ -0.88
RDH11-203ENST00000553384 PHF14O94880 888 aa9.53□□□□□ -0.88
RDH11-203ENST00000553384 MTHFSP49914 203 aa9.53□□□□□ -0.88
RDH11-203ENST00000553384 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
RDH11-203ENST00000553384 RGPD2P0DJD1 1756 aa9.53□□□□□ -0.88
RDH11-203ENST00000553384 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
RDH11-203ENST00000553384 FSTL1Q12841 308 aa9.52□□□□□ -0.88
RDH11-203ENST00000553384 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.88
RDH11-203ENST00000553384 JMYQ8N9B5 988 aa9.52□□□□□ -0.88
RDH11-203ENST00000553384 EYA1Q99502 592 aa9.52□□□□□ -0.88
RDH11-203ENST00000553384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.88
RDH11-203ENST00000553384 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
RDH11-203ENST00000553384 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
RDH11-203ENST00000553384 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
RDH11-203ENST00000553384 MMP10P09238 476 aa9.51□□□□□ -0.89
RDH11-203ENST00000553384 KLRG1Q96E93 195 aa9.51□□□□□ -0.89
RDH11-203ENST00000553384 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
RDH11-203ENST00000553384 PXDNLA1KZ92 1463 aa9.51□□□□□ -0.89
RDH11-203ENST00000553384 GNPATO15228 680 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 CFAP53Q96M91 514 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 PLEKHG2Q9H7P9 1386 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 NCAPD2Q15021 1401 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 C16orf71Q8IYS4 520 aaPredicted RBP9.5□□□□□ -0.89
RDH11-203ENST00000553384 NMRK2Q9NPI5 230 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 TMOD3Q9NYL9 352 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
RDH11-203ENST00000553384 KIF13BQ9NQT8 1826 aa9.5□□□□□ -0.89
RDH11-203ENST00000553384 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
RDH11-203ENST00000553384 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
RDH11-203ENST00000553384 SMIM5Q71RC9 77 aa9.49□□□□□ -0.89
RDH11-203ENST00000553384 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
RDH11-203ENST00000553384 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
RDH11-203ENST00000553384 C10orf71Q711Q0 1435 aa9.49□□□□□ -0.89
RDH11-203ENST00000553384 ITGB4P16144 1822 aa9.49□□□□□ -0.89
RDH11-203ENST00000553384 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 ITPK1Q13572 414 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 SULT6B1Q6IMI4 303 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 U2SURPO15042 1029 aaKnown RBP9.48□□□□□ -0.89
RDH11-203ENST00000553384 FCHSD2O94868 740 aa9.48□□□□□ -0.89
RDH11-203ENST00000553384 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
RDH11-203ENST00000553384 PKD1L3Q7Z443 1732 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 DPEP1P16444 411 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 PPP2R1AP30153 589 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 IL13P35225 146 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 PRELPP51888 382 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 C9orf131Q5VYM1 1079 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
RDH11-203ENST00000553384 HMOX1P09601 288 aa9.46□□□□□ -0.89
RDH11-203ENST00000553384 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.89
RDH11-203ENST00000553384 PIM2Q9P1W9 311 aa9.46□□□□□ -0.89
RDH11-203ENST00000553384 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.89
RDH11-203ENST00000553384 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
RDH11-203ENST00000553384 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
RDH11-203ENST00000553384 GYS1P13807 737 aa9.46□□□□□ -0.9
RDH11-203ENST00000553384 PHKG2P15735 406 aa9.46□□□□□ -0.9
RDH11-203ENST00000553384 KCNA3P22001 575 aa9.46□□□□□ -0.9
RDH11-203ENST00000553384 RFC4P35249 363 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms