RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 SMIM5Q71RC9 77 aa24.23■■□□□ 1.47
PNN-202ENST00000553331 LINC00116Q8NCU8 138 aa24.23■■□□□ 1.47
PNN-202ENST00000553331 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
PNN-202ENST00000553331 KDRP35968 1356 aa24.23■■□□□ 1.47
PNN-202ENST00000553331 KDM6AO15550 1401 aaPredicted RBP24.23■■□□□ 1.47
PNN-202ENST00000553331 NPC1L1Q9UHC9 1359 aa24.21■■□□□ 1.47
PNN-202ENST00000553331 ITPK1Q13572 414 aa24.21■■□□□ 1.47
PNN-202ENST00000553331 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
PNN-202ENST00000553331 AMIGO3Q86WK7 504 aa24.2■■□□□ 1.46
PNN-202ENST00000553331 COL24A1Q17RW2 1714 aa24.2■■□□□ 1.46
PNN-202ENST00000553331 UBR3Q6ZT12 1888 aa24.19■■□□□ 1.46
PNN-202ENST00000553331 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
PNN-202ENST00000553331 YY1P25490 414 aa24.18■■□□□ 1.46
PNN-202ENST00000553331 NFATC2IPQ8NCF5 419 aa24.18■■□□□ 1.46
PNN-202ENST00000553331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.17■■□□□ 1.46
PNN-202ENST00000553331 GNPATO15228 680 aa24.17■■□□□ 1.46
PNN-202ENST00000553331 AKAP4Q5JQC9 854 aa24.16■■□□□ 1.46
PNN-202ENST00000553331 SCN11AQ9UI33 1791 aa24.15■■□□□ 1.46
PNN-202ENST00000553331 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.45
PNN-202ENST00000553331 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
PNN-202ENST00000553331 SLC4A9Q96Q91 983 aa24.14■■□□□ 1.45
PNN-202ENST00000553331 MAP3K5Q99683 1374 aa24.14■■□□□ 1.45
PNN-202ENST00000553331 SSFA2P28290 1259 aa24.13■■□□□ 1.45
PNN-202ENST00000553331 MTHFSDQ2M296 383 aaKnown RBP24.13■■□□□ 1.45
PNN-202ENST00000553331 LGR6Q9HBX8 967 aa24.13■■□□□ 1.45
PNN-202ENST00000553331 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
PNN-202ENST00000553331 VIRMAQ69YN4 1812 aaKnown RBP24.12■■□□□ 1.45
PNN-202ENST00000553331 GPR162Q16538 588 aa24.12■■□□□ 1.45
PNN-202ENST00000553331 NLGN2Q8NFZ4 835 aa24.12■■□□□ 1.45
PNN-202ENST00000553331 CFAP53Q96M91 514 aa24.11■■□□□ 1.45
PNN-202ENST00000553331 RNMTO43148 476 aaKnown RBP24.09■■□□□ 1.45
PNN-202ENST00000553331 SLC52A2Q9HAB3 445 aa24.08■■□□□ 1.45
PNN-202ENST00000553331 RTCBQ9Y3I0 505 aaKnown RBP24.08■■□□□ 1.45
PNN-202ENST00000553331 COL5A3P25940 1745 aaPredicted RBP24.07■■□□□ 1.44
PNN-202ENST00000553331 PPP2R1AP30153 589 aa24.07■■□□□ 1.44
PNN-202ENST00000553331 TRAPPC3LQ5T215 181 aa24.07■■□□□ 1.44
PNN-202ENST00000553331 ZNF831Q5JPB2 1677 aa24.07■■□□□ 1.44
PNN-202ENST00000553331 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
PNN-202ENST00000553331 RC3H1Q5TC82 1133 aaKnown RBP24.04■■□□□ 1.44
PNN-202ENST00000553331 CNTNAP4Q9C0A0 1308 aa24.04■■□□□ 1.44
PNN-202ENST00000553331 MYH14Q7Z406 1995 aaKnown RBP24.03■■□□□ 1.44
PNN-202ENST00000553331 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
PNN-202ENST00000553331 GAS2L2Q8NHY3 880 aa24.02■■□□□ 1.44
PNN-202ENST00000553331 ARHGEF1Q92888 912 aaKnown RBP24.02■■□□□ 1.44
PNN-202ENST00000553331 TJP1Q07157 1748 aa24.01■■□□□ 1.43
PNN-202ENST00000553331 RPS6KA4O75676 772 aa24.01■■□□□ 1.43
PNN-202ENST00000553331 PRKAR2BP31323 418 aa24.01■■□□□ 1.43
PNN-202ENST00000553331 RFC4P35249 363 aa24.01■■□□□ 1.43
PNN-202ENST00000553331 CRKLP46109 303 aaKnown RBP24.01■■□□□ 1.43
PNN-202ENST00000553331 CHD4Q14839 1912 aa24.01■■□□□ 1.43
PNN-202ENST00000553331 MRC1P22897 1456 aa24■■□□□ 1.43
PNN-202ENST00000553331 U2AF1L5P0DN76 240 aaPredicted RBP24■■□□□ 1.43
PNN-202ENST00000553331 U2AF1Q01081 240 aaKnown RBP eCLIP24■■□□□ 1.43
PNN-202ENST00000553331 DNAJC10Q8IXB1 793 aa24■■□□□ 1.43
PNN-202ENST00000553331 CD2APQ9Y5K6 639 aa24■■□□□ 1.43
PNN-202ENST00000553331 GNAT3A8MTJ3 354 aa23.99■■□□□ 1.43
PNN-202ENST00000553331 MMP10P09238 476 aa23.99■■□□□ 1.43
PNN-202ENST00000553331 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
PNN-202ENST00000553331 ADRA2BP18089 450 aa23.98■■□□□ 1.43
PNN-202ENST00000553331 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
PNN-202ENST00000553331 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
PNN-202ENST00000553331 WWC3Q9ULE0 1092 aa23.98■■□□□ 1.43
PNN-202ENST00000553331 ADAMTS7Q9UKP4 1686 aa23.98■■□□□ 1.43
PNN-202ENST00000553331 TEFQ10587 303 aa23.97■■□□□ 1.43
PNN-202ENST00000553331 YBX3P16989 372 aaKnown RBP eCLIP23.96■■□□□ 1.43
PNN-202ENST00000553331 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
PNN-202ENST00000553331 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
PNN-202ENST00000553331 TTC5Q8N0Z6 440 aa23.95■■□□□ 1.42
PNN-202ENST00000553331 NLGN1Q8N2Q7 840 aa23.95■■□□□ 1.42
PNN-202ENST00000553331 GYS1P13807 737 aa23.94■■□□□ 1.42
PNN-202ENST00000553331 INTS5Q6P9B9 1019 aaKnown RBP23.94■■□□□ 1.42
PNN-202ENST00000553331 CCDC87Q9NVE4 849 aa23.94■■□□□ 1.42
PNN-202ENST00000553331 SRP68Q9UHB9 627 aaKnown RBP23.94■■□□□ 1.42
PNN-202ENST00000553331 KCPQ6ZWJ8 1503 aa23.94■■□□□ 1.42
PNN-202ENST00000553331 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
PNN-202ENST00000553331 GRIN3BO60391 1043 aa23.91■■□□□ 1.42
PNN-202ENST00000553331 CYP19A1P11511 503 aaPredicted RBP23.91■■□□□ 1.42
PNN-202ENST00000553331 FCHSD2O94868 740 aa23.9■■□□□ 1.42
PNN-202ENST00000553331 PARP3Q9Y6F1 533 aa23.9■■□□□ 1.42
PNN-202ENST00000553331 UBR2Q8IWV8 1755 aa23.9■■□□□ 1.42
PNN-202ENST00000553331 SIPA1L3O60292 1781 aaPredicted RBP23.89■■□□□ 1.42
PNN-202ENST00000553331 ZNF784Q8NCA9 323 aaPredicted RBP23.89■■□□□ 1.41
PNN-202ENST00000553331 USP42Q9H9J4 1324 aaKnown RBP23.88■■□□□ 1.41
PNN-202ENST00000553331 ZPR1O75312 459 aa23.88■■□□□ 1.41
PNN-202ENST00000553331 DDX10Q13206 875 aaKnown RBP23.88■■□□□ 1.41
PNN-202ENST00000553331 FKBP8Q14318 412 aa23.88■■□□□ 1.41
PNN-202ENST00000553331 RTF1Q92541 710 aaKnown RBP23.88■■□□□ 1.41
PNN-202ENST00000553331 CANXP27824 592 aaKnown RBP23.87■■□□□ 1.41
PNN-202ENST00000553331 ZNF790Q6PG37 636 aa23.87■■□□□ 1.41
PNN-202ENST00000553331 MCM10Q7L590 875 aa23.87■■□□□ 1.41
PNN-202ENST00000553331 VSIG10Q8N0Z9 540 aa23.87■■□□□ 1.41
PNN-202ENST00000553331 ZNF496Q96IT1 587 aaPredicted RBP23.87■■□□□ 1.41
PNN-202ENST00000553331 ZBTB1Q9Y2K1 713 aa23.87■■□□□ 1.41
PNN-202ENST00000553331 SOS1Q07889 1333 aaPredicted RBP23.86■■□□□ 1.41
PNN-202ENST00000553331 BTBD11A6QL63 1104 aa23.86■■□□□ 1.41
PNN-202ENST00000553331 USPL1Q5W0Q7 1092 aa23.86■■□□□ 1.41
PNN-202ENST00000553331 UTRNP46939 3433 aa23.86■■□□□ 1.41
PNN-202ENST00000553331 N4BP2Q86UW6 1770 aaPredicted RBP23.86■■□□□ 1.41
PNN-202ENST00000553331 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
PNN-202ENST00000553331 COL15A1P39059 1388 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms