RNA–Protein interactions for RNA: ENST00000553312.1

AL079307.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL079307.1, Length 5,982 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.1-201ENST00000553312 ANAPC15P60006 121 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 CCDC171Q6TFL3 1326 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 HOOK3Q86VS8 718 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 CHD1LQ86WJ1 897 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 NUP88Q99567 741 aaPredicted RBP10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 NSRP1Q9H0G5 558 aaKnown RBP10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 A0A1B0GUA9 196 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 CCDC121Q6ZUS5 278 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 A0A1B0GUL7 405 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 EBAG9O00559 213 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 CACNA2D4Q7Z3S7 1137 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 OTUD6BQ8N6M0 293 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 ALS2CR12Q96Q35 445 aa10.6□□□□□ -0.71
AL079307.1-201ENST00000553312 YEATS4O95619 227 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 DDX46Q7L014 1031 aaKnown RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 FERMT3Q86UX7 667 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 GNAI2P04899 355 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 NUP133Q8WUM0 1156 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 CPLX3Q8WVH0 158 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 PUS7Q96PZ0 661 aaKnown RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 SCAND2PQ9GZW5 306 aaPredicted RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 FSD2A1L4K1 749 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 IGSF3O75054 1194 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 HMOX1P09601 288 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 MCM6Q14566 821 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 BCAR3O75815 825 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 SSFA2P28290 1259 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 KLHL10Q6JEL2 608 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 VPS36Q86VN1 386 aa10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 CTNNBL1Q8WYA6 563 aaPredicted RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
AL079307.1-201ENST00000553312 GNG11P61952 73 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 NOLC1Q14978 699 aaKnown RBP eCLIP10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 WIZO95785 1651 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 IFT140Q96RY7 1462 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 CTAGE5O15320 804 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 EXOSC9Q06265 439 aaKnown RBP10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 CKAP2LQ8IYA6 745 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 MIPOL1Q8TD10 442 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 FEZ1Q99689 392 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 HOMER2Q9NSB8 354 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 ARID4AP29374 1257 aaPredicted RBP10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 PIP4K2BP78356 416 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 ANKS4BQ8N8V4 417 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 CEP131Q9UPN4 1083 aa10.58□□□□□ -0.72
AL079307.1-201ENST00000553312 KIF3CO14782 793 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 PSME1Q06323 249 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 SOGA3Q5TF21 947 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 CCDC150Q8NCX0 1101 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 MXRA7P84157 204 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 TCP11L2Q8N4U5 519 aa10.57□□□□□ -0.72
AL079307.1-201ENST00000553312 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 CCDC114Q96M63 670 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 JADE2Q9NQC1 790 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 RBM28Q9NW13 759 aaKnown RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 OPA1O60313 960 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 CASTP20810 708 aaKnown RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 KRT32Q14532 448 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 VGFO15240 615 aaPredicted RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 TTC39AQ5SRH9 613 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 OGFRQ9NZT2 677 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 MACROD2A1Z1Q3 448 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 DDX19AQ9NUU7 478 aaKnown RBP10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 VPS18Q9P253 973 aa10.56□□□□□ -0.72
AL079307.1-201ENST00000553312 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 WASF1Q92558 559 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 KIF20AO95235 890 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 CCDC158Q5M9N0 1113 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 ZNF830Q96NB3 372 aaPredicted RBP10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 CTAGE15A4D2H0 777 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 CTAGE8P0CG41 777 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 FERP16591 822 aa10.55□□□□□ -0.72
AL079307.1-201ENST00000553312 CKAP4Q07065 602 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms