RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 TSR2Q969E8 191 aaKnown RBP23.89■■□□□ 1.41
LRP1-204ENST00000553277 LGR6Q9HBX8 967 aa23.89■■□□□ 1.41
LRP1-204ENST00000553277 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
LRP1-204ENST00000553277 SCN11AQ9UI33 1791 aa23.88■■□□□ 1.41
LRP1-204ENST00000553277 TAF7Q15545 349 aaPredicted RBP23.87■■□□□ 1.41
LRP1-204ENST00000553277 USP35Q9P2H5 1018 aa23.87■■□□□ 1.41
LRP1-204ENST00000553277 KDM6AO15550 1401 aaPredicted RBP23.86■■□□□ 1.41
LRP1-204ENST00000553277 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
LRP1-204ENST00000553277 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
LRP1-204ENST00000553277 DCAF5Q96JK2 942 aa23.86■■□□□ 1.41
LRP1-204ENST00000553277 USP21Q9UK80 565 aa23.85■■□□□ 1.41
LRP1-204ENST00000553277 SIPA1L3O60292 1781 aaPredicted RBP23.84■■□□□ 1.41
LRP1-204ENST00000553277 EXOSC9Q06265 439 aaKnown RBP23.84■■□□□ 1.41
LRP1-204ENST00000553277 MRC1P22897 1456 aa23.84■■□□□ 1.41
LRP1-204ENST00000553277 LAS1LQ9Y4W2 734 aaKnown RBP23.83■■□□□ 1.41
LRP1-204ENST00000553277 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.4
LRP1-204ENST00000553277 ZNF428Q96B54 188 aa23.83■■□□□ 1.4
LRP1-204ENST00000553277 ZBTB47Q9UFB7 747 aaPredicted RBP23.83■■□□□ 1.4
LRP1-204ENST00000553277 TNS2Q63HR2 1409 aa23.82■■□□□ 1.4
LRP1-204ENST00000553277 AFF2P51816 1311 aa23.81■■□□□ 1.4
LRP1-204ENST00000553277 ATRNO75882 1429 aa23.8■■□□□ 1.4
LRP1-204ENST00000553277 TEFQ10587 303 aa23.8■■□□□ 1.4
LRP1-204ENST00000553277 EXOC5O00471 708 aa23.79■■□□□ 1.4
LRP1-204ENST00000553277 CLUAP1Q96AJ1 413 aa23.79■■□□□ 1.4
LRP1-204ENST00000553277 CANXP27824 592 aaKnown RBP23.79■■□□□ 1.4
LRP1-204ENST00000553277 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
LRP1-204ENST00000553277 TSPYL4Q9UJ04 414 aa23.79■■□□□ 1.4
LRP1-204ENST00000553277 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
LRP1-204ENST00000553277 ERVV-2B6SEH9 535 aa23.78■■□□□ 1.4
LRP1-204ENST00000553277 VAMP4O75379 141 aa23.77■■□□□ 1.4
LRP1-204ENST00000553277 SOS1Q07889 1333 aaPredicted RBP23.77■■□□□ 1.4
LRP1-204ENST00000553277 ONECUT3O60422 494 aaPredicted RBP23.76■■□□□ 1.39
LRP1-204ENST00000553277 FAM161AQ3B820 660 aa23.76■■□□□ 1.39
LRP1-204ENST00000553277 C8orf58Q8NAV2 365 aa23.76■■□□□ 1.39
LRP1-204ENST00000553277 MIS18AQ9NYP9 233 aa23.76■■□□□ 1.39
LRP1-204ENST00000553277 TSPYL6Q8N831 410 aa23.76■■□□□ 1.39
LRP1-204ENST00000553277 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
LRP1-204ENST00000553277 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
LRP1-204ENST00000553277 CCDC9Q9Y3X0 531 aaKnown RBP23.76■■□□□ 1.39
LRP1-204ENST00000553277 GJD4Q96KN9 370 aaPredicted RBP23.75■■□□□ 1.39
LRP1-204ENST00000553277 THSD7AQ9UPZ6 1657 aa23.74■■□□□ 1.39
LRP1-204ENST00000553277 GLI3P10071 1580 aa23.74■■□□□ 1.39
LRP1-204ENST00000553277 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
LRP1-204ENST00000553277 DDB1Q16531 1140 aa23.74■■□□□ 1.39
LRP1-204ENST00000553277 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
LRP1-204ENST00000553277 DDRGK1Q96HY6 314 aa23.74■■□□□ 1.39
LRP1-204ENST00000553277 BTBD11A6QL63 1104 aa23.73■■□□□ 1.39
LRP1-204ENST00000553277 TWISTNBQ3B726 338 aaPredicted RBP23.73■■□□□ 1.39
LRP1-204ENST00000553277 HEG1Q9ULI3 1381 aa23.73■■□□□ 1.39
LRP1-204ENST00000553277 NFATC2IPQ8NCF5 419 aa23.73■■□□□ 1.39
LRP1-204ENST00000553277 PANK1Q8TE04 598 aa23.72■■□□□ 1.39
LRP1-204ENST00000553277 EIF4A1P60842 406 aaKnown RBP23.71■■□□□ 1.39
LRP1-204ENST00000553277 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
LRP1-204ENST00000553277 COG6Q9Y2V7 657 aa23.71■■□□□ 1.39
LRP1-204ENST00000553277 TOGARAM1Q9Y4F4 1720 aa23.71■■□□□ 1.39
LRP1-204ENST00000553277 HOXB7P09629 217 aa23.7■■□□□ 1.39
LRP1-204ENST00000553277 CABP4P57796 275 aa23.7■■□□□ 1.38
LRP1-204ENST00000553277 SSH1Q8WYL5 1049 aa23.7■■□□□ 1.38
LRP1-204ENST00000553277 KRT24Q2M2I5 525 aa23.69■■□□□ 1.38
LRP1-204ENST00000553277 IGHDP01880 384 aa23.68■■□□□ 1.38
LRP1-204ENST00000553277 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
LRP1-204ENST00000553277 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
LRP1-204ENST00000553277 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
LRP1-204ENST00000553277 MARCH10Q8NA82 808 aaPredicted RBP23.68■■□□□ 1.38
LRP1-204ENST00000553277 FRAT1Q92837 279 aaPredicted RBP23.68■■□□□ 1.38
LRP1-204ENST00000553277 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
LRP1-204ENST00000553277 KCNQ3O43525 872 aa23.67■■□□□ 1.38
LRP1-204ENST00000553277 ELL2O00472 640 aaPredicted RBP23.66■■□□□ 1.38
LRP1-204ENST00000553277 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
LRP1-204ENST00000553277 PAPPAQ13219 1627 aa23.64■■□□□ 1.38
LRP1-204ENST00000553277 ITGB4P16144 1822 aa23.64■■□□□ 1.38
LRP1-204ENST00000553277 MVPQ14764 893 aaKnown RBP23.64■■□□□ 1.38
LRP1-204ENST00000553277 SKAP1Q86WV1 359 aa23.64■■□□□ 1.38
LRP1-204ENST00000553277 BCL9O00512 1426 aa23.64■■□□□ 1.37
LRP1-204ENST00000553277 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
LRP1-204ENST00000553277 CHMP4AQ9BY43 222 aa23.64■■□□□ 1.37
LRP1-204ENST00000553277 CACNA1FO60840 1977 aa23.63■■□□□ 1.37
LRP1-204ENST00000553277 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
LRP1-204ENST00000553277 RLBP1P12271 317 aa23.63■■□□□ 1.37
LRP1-204ENST00000553277 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
LRP1-204ENST00000553277 UBR2Q8IWV8 1755 aa23.63■■□□□ 1.37
LRP1-204ENST00000553277 DZIP1LQ8IYY4 767 aaKnown RBP23.62■■□□□ 1.37
LRP1-204ENST00000553277 MRPL50Q8N5N7 158 aaKnown RBP23.62■■□□□ 1.37
LRP1-204ENST00000553277 RWDD1Q9H446 243 aaPredicted RBP23.62■■□□□ 1.37
LRP1-204ENST00000553277 TMOD3Q9NYL9 352 aa23.61■■□□□ 1.37
LRP1-204ENST00000553277 KIF16BQ96L93 1317 aa23.61■■□□□ 1.37
LRP1-204ENST00000553277 SLC39A6Q13433 755 aa23.6■■□□□ 1.37
LRP1-204ENST00000553277 PIGBQ92521 554 aa23.6■■□□□ 1.37
LRP1-204ENST00000553277 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
LRP1-204ENST00000553277 ARHGAP45Q92619 1136 aa23.6■■□□□ 1.37
LRP1-204ENST00000553277 ZNF496Q96IT1 587 aaPredicted RBP23.59■■□□□ 1.37
LRP1-204ENST00000553277 DOT1LQ8TEK3 1739 aa23.59■■□□□ 1.37
LRP1-204ENST00000553277 CCDC30Q5VVM6 783 aa23.58■■□□□ 1.37
LRP1-204ENST00000553277 KCPQ6ZWJ8 1503 aa23.58■■□□□ 1.37
LRP1-204ENST00000553277 IPO8O15397 1037 aaKnown RBP23.57■■□□□ 1.36
LRP1-204ENST00000553277 RGS3P49796 1198 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 TTC5Q8N0Z6 440 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 FMNL2Q96PY5 1086 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 PCDHB15Q9Y5E8 787 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 RBM6P78332 1123 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms