RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 MRC1P22897 1456 aa22.44■■□□□ 1.18
ITGA5-213ENST00000553071 GNAI1P63096 354 aa22.44■■□□□ 1.18
ITGA5-213ENST00000553071 ADAMTS7Q9UKP4 1686 aa22.44■■□□□ 1.18
ITGA5-213ENST00000553071 SALL2Q9Y467 1007 aaPredicted RBP22.44■■□□□ 1.18
ITGA5-213ENST00000553071 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
ITGA5-213ENST00000553071 HNRNPUQ00839 825 aaKnown RBP eCLIP22.43■■□□□ 1.181e-7■□□□□ 9.1
ITGA5-213ENST00000553071 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
ITGA5-213ENST00000553071 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
ITGA5-213ENST00000553071 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
ITGA5-213ENST00000553071 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
ITGA5-213ENST00000553071 IFT57Q9NWB7 429 aa22.42■■□□□ 1.18
ITGA5-213ENST00000553071 NHSQ6T4R5 1651 aa22.42■■□□□ 1.18
ITGA5-213ENST00000553071 ZNF790Q6PG37 636 aa22.41■■□□□ 1.18
ITGA5-213ENST00000553071 DOT1LQ8TEK3 1739 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 DLG5Q8TDM6 1919 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 CHL1O00533 1208 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 PTF1AQ7RTS3 328 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 TSPYL4Q9UJ04 414 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
ITGA5-213ENST00000553071 SBF2Q86WG5 1849 aa22.39■■□□□ 1.17
ITGA5-213ENST00000553071 SLC27A3Q5K4L6 730 aa22.39■■□□□ 1.17
ITGA5-213ENST00000553071 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
ITGA5-213ENST00000553071 GOLGA2Q08379 1002 aa22.38■■□□□ 1.17
ITGA5-213ENST00000553071 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
ITGA5-213ENST00000553071 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
ITGA5-213ENST00000553071 ZNF853P0CG23 659 aa22.37■■□□□ 1.17
ITGA5-213ENST00000553071 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
ITGA5-213ENST00000553071 FMNL2Q96PY5 1086 aa22.37■■□□□ 1.17
ITGA5-213ENST00000553071 TOGARAM1Q9Y4F4 1720 aa22.37■■□□□ 1.17
ITGA5-213ENST00000553071 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
ITGA5-213ENST00000553071 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
ITGA5-213ENST00000553071 SLC39A6Q13433 755 aa22.36■■□□□ 1.17
ITGA5-213ENST00000553071 TEX13AQ9BXU3 409 aaPredicted RBP22.36■■□□□ 1.17
ITGA5-213ENST00000553071 ITGB4P16144 1822 aa22.36■■□□□ 1.17
ITGA5-213ENST00000553071 LOC102724428A0A0B4J2F2 783 aa22.35■■□□□ 1.17
ITGA5-213ENST00000553071 E9PSI1 815 aa22.35■■□□□ 1.17
ITGA5-213ENST00000553071 SIK1P57059 783 aa22.35■■□□□ 1.17
ITGA5-213ENST00000553071 RBM42Q9BTD8 480 aaKnown RBP22.35■■□□□ 1.17
ITGA5-213ENST00000553071 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
ITGA5-213ENST00000553071 PTCD1O75127 700 aaKnown RBP22.34■■□□□ 1.17
ITGA5-213ENST00000553071 CAMKK2Q96RR4 588 aa22.34■■□□□ 1.17
ITGA5-213ENST00000553071 MIS18AQ9NYP9 233 aa22.34■■□□□ 1.17
ITGA5-213ENST00000553071 ZBED9Q6R2W3 1325 aa22.33■■□□□ 1.17
ITGA5-213ENST00000553071 EP400Q96L91 3159 aa22.33■■□□□ 1.17
ITGA5-213ENST00000553071 TXNRD1Q16881 649 aa22.33■■□□□ 1.17
ITGA5-213ENST00000553071 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
ITGA5-213ENST00000553071 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
ITGA5-213ENST00000553071 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
ITGA5-213ENST00000553071 BTAF1O14981 1849 aa22.31■■□□□ 1.16
ITGA5-213ENST00000553071 SOCS7O14512 581 aa22.31■■□□□ 1.16
ITGA5-213ENST00000553071 SNRPA1P09661 255 aaKnown RBP22.31■■□□□ 1.16
ITGA5-213ENST00000553071 ATP6V1AP38606 617 aa22.31■■□□□ 1.16
ITGA5-213ENST00000553071 EIF4A1P60842 406 aaKnown RBP22.31■■□□□ 1.16
ITGA5-213ENST00000553071 ZNF496Q96IT1 587 aaPredicted RBP22.31■■□□□ 1.16
ITGA5-213ENST00000553071 SOS1Q07889 1333 aaPredicted RBP22.3■■□□□ 1.16
ITGA5-213ENST00000553071 VIRMAQ69YN4 1812 aaKnown RBP22.29■■□□□ 1.16
ITGA5-213ENST00000553071 HEG1Q9ULI3 1381 aa22.29■■□□□ 1.16
ITGA5-213ENST00000553071 STARD3NLO95772 234 aa22.29■■□□□ 1.16
ITGA5-213ENST00000553071 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
ITGA5-213ENST00000553071 SIPA1L3O60292 1781 aaPredicted RBP22.28■■□□□ 1.16
ITGA5-213ENST00000553071 KCNQ3O43525 872 aa22.28■■□□□ 1.16
ITGA5-213ENST00000553071 HOXB7P09629 217 aa22.28■■□□□ 1.16
ITGA5-213ENST00000553071 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
ITGA5-213ENST00000553071 EZH2Q15910 746 aaKnown RBP22.28■■□□□ 1.16
ITGA5-213ENST00000553071 PROM2Q8N271 834 aa22.27■■□□□ 1.16
ITGA5-213ENST00000553071 TNS1Q9HBL0 1735 aaKnown RBP22.27■■□□□ 1.16
ITGA5-213ENST00000553071 GIGYF1O75420 1035 aaPredicted RBP22.26■■□□□ 1.15
ITGA5-213ENST00000553071 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
ITGA5-213ENST00000553071 RGPD3A6NKT7 1758 aaPredicted RBP22.25■■□□□ 1.15
ITGA5-213ENST00000553071 RGPD4Q7Z3J3 1758 aa22.25■■□□□ 1.15
ITGA5-213ENST00000553071 RC3H1Q5TC82 1133 aaKnown RBP22.24■■□□□ 1.15
ITGA5-213ENST00000553071 FANCIQ9NVI1 1328 aa22.24■■□□□ 1.15
ITGA5-213ENST00000553071 KCPQ6ZWJ8 1503 aa22.23■■□□□ 1.15
ITGA5-213ENST00000553071 TRMT2AQ8IZ69 625 aaKnown RBP22.23■■□□□ 1.15
ITGA5-213ENST00000553071 TSR2Q969E8 191 aaKnown RBP22.23■■□□□ 1.15
ITGA5-213ENST00000553071 SLC4A9Q96Q91 983 aa22.23■■□□□ 1.15
ITGA5-213ENST00000553071 LRRC4BQ9NT99 713 aa22.23■■□□□ 1.15
ITGA5-213ENST00000553071 PAPPAQ13219 1627 aa22.22■■□□□ 1.15
ITGA5-213ENST00000553071 DNAJC10Q8IXB1 793 aa22.22■■□□□ 1.15
ITGA5-213ENST00000553071 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
ITGA5-213ENST00000553071 ITPK1Q13572 414 aa22.21■■□□□ 1.15
ITGA5-213ENST00000553071 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
ITGA5-213ENST00000553071 ZNF831Q5JPB2 1677 aa22.2■■□□□ 1.15
ITGA5-213ENST00000553071 CT47B1P0C2W7 299 aaPredicted RBP22.2■■□□□ 1.14
ITGA5-213ENST00000553071 CYP19A1P11511 503 aaPredicted RBP22.2■■□□□ 1.14
ITGA5-213ENST00000553071 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
ITGA5-213ENST00000553071 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
ITGA5-213ENST00000553071 LY75O60449 1722 aa22.2■■□□□ 1.14
ITGA5-213ENST00000553071 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
ITGA5-213ENST00000553071 TWISTNBQ3B726 338 aaPredicted RBP22.19■■□□□ 1.14
ITGA5-213ENST00000553071 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
ITGA5-213ENST00000553071 AK7Q96M32 723 aa22.19■■□□□ 1.14
ITGA5-213ENST00000553071 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
ITGA5-213ENST00000553071 USP16Q9Y5T5 823 aa22.19■■□□□ 1.14
ITGA5-213ENST00000553071 ERBB4Q15303 1308 aa22.19■■□□□ 1.14
ITGA5-213ENST00000553071 CNTNAP4Q9C0A0 1308 aa22.19■■□□□ 1.14
ITGA5-213ENST00000553071 UBR2Q8IWV8 1755 aa22.18■■□□□ 1.14
ITGA5-213ENST00000553071 KCNQ4P56696 695 aa22.18■■□□□ 1.14
ITGA5-213ENST00000553071 EXOSC9Q06265 439 aaKnown RBP22.18■■□□□ 1.14
ITGA5-213ENST00000553071 FLAD1Q8NFF5 587 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms