RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ITPK1Q13572 414 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 KIAA1210Q9ULL0 1709 aa9.65□□□□□ -0.87
LETMD1-236ENST00000553043 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
LETMD1-236ENST00000553043 POTECB2RU33 542 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
LETMD1-236ENST00000553043 CHRNA5P30532 468 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 HOXC9P31274 260 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 VEGFBP49765 207 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 WBP1LQ9NX94 342 aa9.64□□□□□ -0.87
LETMD1-236ENST00000553043 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 PCDH11XQ9BZA7 1347 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 PCDH11YQ9BZA8 1340 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 KIAA1551Q9HCM1 1747 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 TMC1Q8TDI8 760 aa9.63□□□□□ -0.87
LETMD1-236ENST00000553043 ARHGEF1Q92888 912 aaKnown RBP9.63□□□□□ -0.87
LETMD1-236ENST00000553043 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
LETMD1-236ENST00000553043 TNRC6CQ9HCJ0 1690 aaKnown RBP9.63□□□□□ -0.87
LETMD1-236ENST00000553043 ZC3H4Q9UPT8 1303 aaKnown RBP9.62□□□□□ -0.87
LETMD1-236ENST00000553043 CYP27B1O15528 508 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 HSPA8P11142 646 aaKnown RBP9.62□□□□□ -0.87
LETMD1-236ENST00000553043 GYS1P13807 737 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 LMNB1P20700 586 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
LETMD1-236ENST00000553043 LTN1O94822 1766 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 RFC4P35249 363 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 DPY19L2Q6NUT2 758 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 HDGFL2Q7Z4V5 671 aaPredicted RBP9.61□□□□□ -0.87
LETMD1-236ENST00000553043 ASAP1Q9ULH1 1129 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 UBR3Q6ZT12 1888 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
LETMD1-236ENST00000553043 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
LETMD1-236ENST00000553043 KIF13BQ9NQT8 1826 aa9.59□□□□□ -0.87
LETMD1-236ENST00000553043 FAM208AQ9UK61 1670 aaKnown RBP9.59□□□□□ -0.87
LETMD1-236ENST00000553043 TMOD3Q9NYL9 352 aa9.59□□□□□ -0.87
LETMD1-236ENST00000553043 DDR1Q08345 913 aa9.58□□□□□ -0.88
LETMD1-236ENST00000553043 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
LETMD1-236ENST00000553043 COG3Q96JB2 828 aa9.58□□□□□ -0.88
LETMD1-236ENST00000553043 CD163L1Q9NR16 1453 aa9.58□□□□□ -0.88
LETMD1-236ENST00000553043 KDM6AO15550 1401 aaPredicted RBP9.57□□□□□ -0.88
LETMD1-236ENST00000553043 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
LETMD1-236ENST00000553043 ADRA2BP18089 450 aa9.57□□□□□ -0.88
LETMD1-236ENST00000553043 MAP2K1Q02750 393 aaPredicted RBP9.57□□□□□ -0.88
LETMD1-236ENST00000553043 FKBP8Q14318 412 aa9.57□□□□□ -0.88
LETMD1-236ENST00000553043 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
LETMD1-236ENST00000553043 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
LETMD1-236ENST00000553043 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
LETMD1-236ENST00000553043 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
LETMD1-236ENST00000553043 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
LETMD1-236ENST00000553043 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
LETMD1-236ENST00000553043 RPS6KA4O75676 772 aa9.56□□□□□ -0.88
LETMD1-236ENST00000553043 TERF2IPQ9NYB0 399 aa9.56□□□□□ -0.88
LETMD1-236ENST00000553043 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
LETMD1-236ENST00000553043 NFKBIEO00221 500 aa9.55□□□□□ -0.88
LETMD1-236ENST00000553043 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
LETMD1-236ENST00000553043 DEFB115Q30KQ5 88 aa9.55□□□□□ -0.88
LETMD1-236ENST00000553043 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
LETMD1-236ENST00000553043 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
LETMD1-236ENST00000553043 MON2Q7Z3U7 1717 aa9.55□□□□□ -0.88
LETMD1-236ENST00000553043 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
LETMD1-236ENST00000553043 WDR33Q9C0J8 1336 aaKnown RBP9.55□□□□□ -0.88
LETMD1-236ENST00000553043 A0A1W2PP64 1363 aa9.54□□□□□ -0.88
LETMD1-236ENST00000553043 DDNO94850 711 aaPredicted RBP9.54□□□□□ -0.88
LETMD1-236ENST00000553043 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
LETMD1-236ENST00000553043 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
LETMD1-236ENST00000553043 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
LETMD1-236ENST00000553043 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
LETMD1-236ENST00000553043 TSKSQ9UJT2 592 aa9.54□□□□□ -0.88
LETMD1-236ENST00000553043 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
LETMD1-236ENST00000553043 RGPD2P0DJD1 1756 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 RASSF10A6NK89 507 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
LETMD1-236ENST00000553043 ITGBL1O95965 494 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-236ENST00000553043 GRM1Q13255 1194 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 EAPPQ56P03 285 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-236ENST00000553043 LDHDQ86WU2 507 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 MCOLN1Q9GZU1 580 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 ZNF219Q9P2Y4 722 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-236ENST00000553043 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
LETMD1-236ENST00000553043 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 CLEC11AQ9Y240 323 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 SBF1O95248 1867 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 CNTNAP4Q9C0A0 1308 aa9.53□□□□□ -0.88
LETMD1-236ENST00000553043 RTL1A6NKG5 1358 aa9.52□□□□□ -0.88
LETMD1-236ENST00000553043 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
LETMD1-236ENST00000553043 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
LETMD1-236ENST00000553043 USP42Q9H9J4 1324 aaKnown RBP9.52□□□□□ -0.89
LETMD1-236ENST00000553043 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
LETMD1-236ENST00000553043 KDRP35968 1356 aa9.51□□□□□ -0.89
LETMD1-236ENST00000553043 TM4SF1P30408 202 aa9.51□□□□□ -0.89
LETMD1-236ENST00000553043 IQCA1LA6NCM1 817 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms