RNA–Protein interactions for RNA: ENST00000553042.1

CDK17-212, Transcript of cyclin dependent kinase 17, humanhuman

TSL 4

Gene CDK17, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-212ENST00000553042 USP17L4A6NCW7 530 aa10.07□□□□□ -0.8
CDK17-212ENST00000553042 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
CDK17-212ENST00000553042 USP17L2Q6R6M4 530 aa10.07□□□□□ -0.8
CDK17-212ENST00000553042 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
CDK17-212ENST00000553042 USP17L1Q7RTZ2 530 aa10.07□□□□□ -0.8
CDK17-212ENST00000553042 GTF2E1P29083 439 aaPredicted RBP10.06□□□□□ -0.8
CDK17-212ENST00000553042 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
CDK17-212ENST00000553042 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
CDK17-212ENST00000553042 TIMMDC1Q9NPL8 285 aa10.06□□□□□ -0.8
CDK17-212ENST00000553042 C4orf17Q53FE4 359 aa10.05□□□□□ -0.8
CDK17-212ENST00000553042 RHBDD1Q8TEB9 315 aa10.05□□□□□ -0.8
CDK17-212ENST00000553042 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
CDK17-212ENST00000553042 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
CDK17-212ENST00000553042 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
CDK17-212ENST00000553042 LORP23490 312 aaPredicted RBP10.04□□□□□ -0.8
CDK17-212ENST00000553042 PHKA2P46019 1235 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 SMTNP53814 917 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 KRT76Q01546 638 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 GAS2L1Q99501 681 aaPredicted RBP10.04□□□□□ -0.8
CDK17-212ENST00000553042 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
CDK17-212ENST00000553042 RIPOR1Q6ZS17 1223 aa10.03□□□□□ -0.8
CDK17-212ENST00000553042 ZNF837Q96EG3 531 aaPredicted RBP10.03□□□□□ -0.8
CDK17-212ENST00000553042 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
CDK17-212ENST00000553042 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
CDK17-212ENST00000553042 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 F11P03951 625 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 PSME1Q06323 249 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 MTFR1Q15390 333 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 DBN1Q16643 649 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 ZSCAN1Q8NBB4 408 aa10.02□□□□□ -0.81
CDK17-212ENST00000553042 A6NJY4 79 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 H7C1W4 665 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 BACH1O14867 736 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 CLDN10P78369 228 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 RNFT1Q5M7Z0 435 aa10.01□□□□□ -0.81
CDK17-212ENST00000553042 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
CDK17-212ENST00000553042 MAFBQ9Y5Q3 323 aaPredicted RBP10.01□□□□□ -0.81
CDK17-212ENST00000553042 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
CDK17-212ENST00000553042 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
CDK17-212ENST00000553042 SERBP1Q8NC51 408 aaKnown RBP eCLIP10□□□□□ -0.81
CDK17-212ENST00000553042 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
CDK17-212ENST00000553042 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
CDK17-212ENST00000553042 PPP1R12CQ9BZL4 782 aa10□□□□□ -0.81
CDK17-212ENST00000553042 ZNF358Q9NW07 568 aa10□□□□□ -0.81
CDK17-212ENST00000553042 STK17AQ9UEE5 414 aa10□□□□□ -0.81
CDK17-212ENST00000553042 IQSEC3Q9UPP2 1182 aaPredicted RBP10□□□□□ -0.81
CDK17-212ENST00000553042 KIAA1024Q9UPX6 916 aa10□□□□□ -0.81
CDK17-212ENST00000553042 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
CDK17-212ENST00000553042 ZNF295-AS1Q8N0V1 137 aa9.99□□□□□ -0.81
CDK17-212ENST00000553042 OGFOD1Q8N543 542 aa9.99□□□□□ -0.81
CDK17-212ENST00000553042 ZNF777Q9ULD5 760 aaPredicted RBP9.99□□□□□ -0.81
CDK17-212ENST00000553042 LARGE2Q8N3Y3 721 aa9.98□□□□□ -0.81
CDK17-212ENST00000553042 NIFKQ9BYG3 293 aaKnown RBP9.98□□□□□ -0.81
CDK17-212ENST00000553042 GPAMQ9HCL2 828 aa9.98□□□□□ -0.81
CDK17-212ENST00000553042 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
CDK17-212ENST00000553042 PLA2G4AP47712 749 aa9.97□□□□□ -0.81
CDK17-212ENST00000553042 CCDC102BQ68D86 513 aa9.97□□□□□ -0.81
CDK17-212ENST00000553042 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
CDK17-212ENST00000553042 DNAAF2Q9NVR5 837 aaKnown RBP9.97□□□□□ -0.81
CDK17-212ENST00000553042 USP3Q9Y6I4 520 aa9.97□□□□□ -0.81
CDK17-212ENST00000553042 THBS1P07996 1170 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 MSX1P28360 303 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 EPHA4P54764 986 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 GAS6Q14393 721 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 SIX5Q8N196 739 aa9.96□□□□□ -0.82
CDK17-212ENST00000553042 GTPBP3Q969Y2 492 aaKnown RBP9.96□□□□□ -0.82
CDK17-212ENST00000553042 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.82
CDK17-212ENST00000553042 SCHIP1Q9P0W5 487 aaPredicted RBP9.96□□□□□ -0.82
CDK17-212ENST00000553042 GPR25O00155 361 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 DKK1O94907 266 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 FOXK2Q01167 660 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 LBRQ14739 615 aaKnown RBP9.94□□□□□ -0.82
CDK17-212ENST00000553042 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 ZMYND15Q9H091 742 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
CDK17-212ENST00000553042 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 M0R2N6 131 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 RASA1P20936 1047 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
CDK17-212ENST00000553042 PGBD3Q8N328 593 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 ZNF594Q96JF6 807 aaPredicted RBP9.93□□□□□ -0.82
CDK17-212ENST00000553042 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 CABP1Q9NZU7 370 aa9.93□□□□□ -0.82
CDK17-212ENST00000553042 ATP4AP20648 1035 aa9.92□□□□□ -0.82
CDK17-212ENST00000553042 LMOD1P29536 600 aaPredicted RBP9.92□□□□□ -0.82
CDK17-212ENST00000553042 TNS4Q8IZW8 715 aa9.92□□□□□ -0.82
CDK17-212ENST00000553042 SRSF11Q05519 484 aaKnown RBP9.91□□□□□ -0.82
CDK17-212ENST00000553042 UBAP2LQ14157 1087 aaKnown RBP9.91□□□□□ -0.82
CDK17-212ENST00000553042 EFHC2Q5JST6 749 aa9.91□□□□□ -0.82
CDK17-212ENST00000553042 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
CDK17-212ENST00000553042 SLC9A9Q8IVB4 645 aa9.91□□□□□ -0.82
CDK17-212ENST00000553042 AIDAQ96BJ3 306 aa9.91□□□□□ -0.82
CDK17-212ENST00000553042 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms