RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
CNOT2-242ENST00000553020 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CNOT2-242ENST00000553020 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-242ENST00000553020 MSH5O43196 834 aa12.85□□□□□ -0.35
CNOT2-242ENST00000553020 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-242ENST00000553020 IP6K1Q92551 441 aa12.85□□□□□ -0.35
CNOT2-242ENST00000553020 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
CNOT2-242ENST00000553020 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-242ENST00000553020 NFAT5O94916 1531 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
CNOT2-242ENST00000553020 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 ZBTB40Q9NUA8 1239 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 CRB1P82279 1406 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
CNOT2-242ENST00000553020 LTN1O94822 1766 aa12.84□□□□□ -0.35
CNOT2-242ENST00000553020 SLIT3O75094 1523 aa12.83□□□□□ -0.35
CNOT2-242ENST00000553020 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
CNOT2-242ENST00000553020 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
CNOT2-242ENST00000553020 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
CNOT2-242ENST00000553020 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.36
CNOT2-242ENST00000553020 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 BECN1Q14457 450 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
CNOT2-242ENST00000553020 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
CNOT2-242ENST00000553020 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
CNOT2-242ENST00000553020 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
CNOT2-242ENST00000553020 HMMRO75330 724 aa12.8□□□□□ -0.36
CNOT2-242ENST00000553020 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
CNOT2-242ENST00000553020 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
CNOT2-242ENST00000553020 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
CNOT2-242ENST00000553020 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
CNOT2-242ENST00000553020 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
CNOT2-242ENST00000553020 FOXO3O43524 673 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 UNC5CLQ8IV45 518 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 DNAJC5GQ8N7S2 189 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 USP19O94966 1318 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
CNOT2-242ENST00000553020 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-242ENST00000553020 GCP02774 474 aa12.78□□□□□ -0.36
CNOT2-242ENST00000553020 TEFQ10587 303 aa12.78□□□□□ -0.36
CNOT2-242ENST00000553020 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-242ENST00000553020 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
CNOT2-242ENST00000553020 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
CNOT2-242ENST00000553020 MST1RQ04912 1400 aa12.78□□□□□ -0.36
CNOT2-242ENST00000553020 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
CNOT2-242ENST00000553020 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
CNOT2-242ENST00000553020 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 ABCC6O95255 1503 aa12.77□□□□□ -0.37
CNOT2-242ENST00000553020 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
CNOT2-242ENST00000553020 HOXB7P09629 217 aa12.76□□□□□ -0.37
CNOT2-242ENST00000553020 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
CNOT2-242ENST00000553020 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
CNOT2-242ENST00000553020 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
CNOT2-242ENST00000553020 APLP1P51693 650 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
CNOT2-242ENST00000553020 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
CNOT2-242ENST00000553020 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
CNOT2-242ENST00000553020 A0A0G2JS52 829 aa12.74□□□□□ -0.37
CNOT2-242ENST00000553020 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-242ENST00000553020 GNAI3P08754 354 aa12.74□□□□□ -0.37
CNOT2-242ENST00000553020 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-242ENST00000553020 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-242ENST00000553020 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
CNOT2-242ENST00000553020 FHDC1Q9C0D6 1143 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-242ENST00000553020 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
CNOT2-242ENST00000553020 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CNOT2-242ENST00000553020 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CNOT2-242ENST00000553020 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
CNOT2-242ENST00000553020 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
CNOT2-242ENST00000553020 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 FLIIQ13045 1269 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
CNOT2-242ENST00000553020 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
CNOT2-242ENST00000553020 COL22A1Q8NFW1 1626 aaPredicted RBP12.71□□□□□ -0.37
CNOT2-242ENST00000553020 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
CNOT2-242ENST00000553020 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
CNOT2-242ENST00000553020 GPR162Q16538 588 aa12.71□□□□□ -0.37
CNOT2-242ENST00000553020 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms