RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 RAPGEF4Q8WZA2 1011 aa12.61□□□□□ -0.39
PRKCH-203ENST00000552875 RTCBQ9Y3I0 505 aaKnown RBP12.61□□□□□ -0.39
PRKCH-203ENST00000552875 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
PRKCH-203ENST00000552875 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
PRKCH-203ENST00000552875 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
PRKCH-203ENST00000552875 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
PRKCH-203ENST00000552875 SIK1P57059 783 aa12.6□□□□□ -0.39
PRKCH-203ENST00000552875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRKCH-203ENST00000552875 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
PRKCH-203ENST00000552875 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-203ENST00000552875 RFC4P35249 363 aa12.59□□□□□ -0.39
PRKCH-203ENST00000552875 RASSF7Q02833 373 aa12.59□□□□□ -0.39
PRKCH-203ENST00000552875 DEFB115Q30KQ5 88 aa12.59□□□□□ -0.39
PRKCH-203ENST00000552875 ARFGEF1Q9Y6D6 1849 aa12.59□□□□□ -0.39
PRKCH-203ENST00000552875 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
PRKCH-203ENST00000552875 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
PRKCH-203ENST00000552875 UBR3Q6ZT12 1888 aa12.58□□□□□ -0.4
PRKCH-203ENST00000552875 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
PRKCH-203ENST00000552875 PASKQ96RG2 1323 aa12.58□□□□□ -0.4
PRKCH-203ENST00000552875 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
PRKCH-203ENST00000552875 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
PRKCH-203ENST00000552875 RASSF10A6NK89 507 aa12.57□□□□□ -0.4
PRKCH-203ENST00000552875 POTECB2RU33 542 aa12.57□□□□□ -0.4
PRKCH-203ENST00000552875 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-203ENST00000552875 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
PRKCH-203ENST00000552875 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
PRKCH-203ENST00000552875 WDR33Q9C0J8 1336 aaKnown RBP12.57□□□□□ -0.4
PRKCH-203ENST00000552875 MCOLN1Q9GZU1 580 aa12.56□□□□□ -0.4
PRKCH-203ENST00000552875 MEGF6O75095 1541 aa12.56□□□□□ -0.4
PRKCH-203ENST00000552875 C4AP0C0L4 1744 aa12.55□□□□□ -0.4
PRKCH-203ENST00000552875 GYS1P13807 737 aa12.55□□□□□ -0.4
PRKCH-203ENST00000552875 CHRNA5P30532 468 aa12.55□□□□□ -0.4
PRKCH-203ENST00000552875 NME9Q86XW9 330 aa12.55□□□□□ -0.4
PRKCH-203ENST00000552875 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
PRKCH-203ENST00000552875 ECE1P42892 770 aa12.54□□□□□ -0.4
PRKCH-203ENST00000552875 AMPHP49418 695 aa12.54□□□□□ -0.4
PRKCH-203ENST00000552875 PIGBQ92521 554 aa12.54□□□□□ -0.4
PRKCH-203ENST00000552875 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
PRKCH-203ENST00000552875 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
PRKCH-203ENST00000552875 LTN1O94822 1766 aa12.53□□□□□ -0.4
PRKCH-203ENST00000552875 CA12O43570 354 aa12.53□□□□□ -0.4
PRKCH-203ENST00000552875 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
PRKCH-203ENST00000552875 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
PRKCH-203ENST00000552875 ITPK1Q13572 414 aa12.52□□□□□ -0.41
PRKCH-203ENST00000552875 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.41
PRKCH-203ENST00000552875 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
PRKCH-203ENST00000552875 PDE4DIPQ5VU43 2346 aa12.52□□□□□ -0.41
PRKCH-203ENST00000552875 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
PRKCH-203ENST00000552875 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
PRKCH-203ENST00000552875 HOXC9P31274 260 aa12.51□□□□□ -0.41
PRKCH-203ENST00000552875 DGKZQ13574 1117 aa12.51□□□□□ -0.41
PRKCH-203ENST00000552875 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-203ENST00000552875 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-203ENST00000552875 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
PRKCH-203ENST00000552875 SBF1O95248 1867 aa12.51□□□□□ -0.41
PRKCH-203ENST00000552875 RC3H1Q5TC82 1133 aaKnown RBP12.5□□□□□ -0.41
PRKCH-203ENST00000552875 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
PRKCH-203ENST00000552875 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-203ENST00000552875 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
PRKCH-203ENST00000552875 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-203ENST00000552875 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-203ENST00000552875 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
PRKCH-203ENST00000552875 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
PRKCH-203ENST00000552875 RPS6KA4O75676 772 aa12.48□□□□□ -0.41
PRKCH-203ENST00000552875 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
PRKCH-203ENST00000552875 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
PRKCH-203ENST00000552875 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
PRKCH-203ENST00000552875 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
PRKCH-203ENST00000552875 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
PRKCH-203ENST00000552875 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
PRKCH-203ENST00000552875 CYP27B1O15528 508 aa12.47□□□□□ -0.41
PRKCH-203ENST00000552875 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-203ENST00000552875 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
PRKCH-203ENST00000552875 CAPNS2Q96L46 248 aa12.47□□□□□ -0.41
PRKCH-203ENST00000552875 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-203ENST00000552875 ASAP1Q9ULH1 1129 aa12.47□□□□□ -0.41
PRKCH-203ENST00000552875 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 NFKBIEO00221 500 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 MAP2K2P36507 400 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 GRM1Q13255 1194 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-203ENST00000552875 COG3Q96JB2 828 aa12.46□□□□□ -0.41
PRKCH-203ENST00000552875 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
PRKCH-203ENST00000552875 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 SOX10P56693 466 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 DDR1Q08345 913 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-203ENST00000552875 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
PRKCH-203ENST00000552875 H0YIN7 160 aa12.44□□□□□ -0.42
PRKCH-203ENST00000552875 FKBP8Q14318 412 aa12.44□□□□□ -0.42
PRKCH-203ENST00000552875 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
PRKCH-203ENST00000552875 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-203ENST00000552875 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
PRKCH-203ENST00000552875 MON2Q7Z3U7 1717 aa12.43□□□□□ -0.42
PRKCH-203ENST00000552875 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
PRKCH-203ENST00000552875 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms